Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1040 ATGGCAGCCATCAAGCGGTCTCAGGCCAARCAGCGCCGACACCCTGACACGTTCCATAACCAACTCTTGTTCCAAAGTAACCACTCTAACAACCTCCAACAAACTCAGCAACCGTTTTCTGTTTCGTCGGTTAAAGTTGAGCTGCAGCATTTGGTGATATCGATTCTTGATGACCCGGTTGTCAGTCGGGTTTTCGCSGAAGCGGGTTTCCGGAGCTCCGAAATTAAGCTCGCGATACTCAGGCCCTTGCCWCAGCTTTTTCGCTACTCGAGATCGCGTGGGCCGCCGGTTTTTCTATGTAACTTGCCGGAACAAGGCCGCCGGGGAGGGTTTTTCGGGTTCCCGTTTTCCGGCWGCGGAGACGGAGGGGAGGAMGAGAGTTTCAGGAGGATTGGGGAGGTTCTGGTGAGAAGCAAGGGGAGGAACCCGGTGCTGCTTGGCGCGTGTGCTGGCGAGGCGATGCGGCAGTTCGTGGAGGCGGTGGAGAAGCGGAGGGAGGGGGTGCTGCCGGTGGAGCTGGTAGGGTTGAGGATTGTYTCCGGGATTAGGGAAGCGGAGGAGGTGGCGGAGAAGGGCGTGGGGCCAGGAGTGGTGGTGAATTTGGGGGACTTGAAGGGTTTTGTGGCGGAGGAGGAGAATAYCGGCGGTGAAGAGGGTGTTCTTGGGGAACTGGGGCGGTTGTTGAAGGTTCATAGTGAGAGGGTATGGTTGATTGGTTTTGCTCGGAGCTATGAGTCTTACTTAAAYTTTGTTGGAAGGTTTCCTTTTGTCGAGAAAGATTGGGATTTGCAGCTTCTTCCAATTACTTCTCTTCAATCTTGCCAGAAACCAAGGTCCAGTTTAATGGATTCATTTGTACCATTTGGTGGATTTTTCTCTTCCCCTTCTGATTTGAAAAGTCCACTACCTGGCTGTARTCCCAATCTCAGGCACCGTCAAAACAGCGAAAGGTGTGAACAAGAAGTGCCTGCTCCAAAGGAAAGATTTTCTTCTTTYGCTGTTGAACCATGTCAATCTAACTATCAGCCATGGCTACAGATTGCAGAAATRAATGCAGCAAAAGGATTGAATGCTAAGGGATTTTCCGAAGCAAATTCTTGTCCGAATGTTATGGGTTTTCTTTGTACTAAAGATAAAAAGAAAGATGCTGAAAATCGCGACAACAAAGTTACAGACAATTCTCCCGTTGAAGTCATCGATCTAAACTCGGAAGTTCCAGTCAATGTGCAAATTATGTCTACATCACAACCAACCAGTCCTTTTTCTTTGGCTTTCAAGGAAATGCAGGGGAAGCATACTTCGAAACTTGTGGAGATGTTCCAAAAAGCTGAAGATCTCGAGTTAGCTGACCTGAGATCATGCAACATCTCCAATTCAAGTGTGTGCGATGGTAGTGAAATGTCTCCAACTTCAGTTAATTCTGTAACCACAGATCTGGGTRTAGGAKTATGTRCTTCTCCTACCAGCAATAAATTTAAGAAACCTARTGACGAATATTCAATGGYTCCTCCAAAGCAAATRGGGAGTCAATTTTCTTCWAACTTCAATTTGGCTGATGGGAATATCTTGAAYCATKTGTCACAGTCTTCTTCCTGCTTAAGTTTCGACCATGTTAGACAAGTTGATGCMAGAAATCCCAAAAGCCTTTTTGAAGRTCTATCGAAGGAGGTAACCTGGCAAGARGAAGCATTACATGCTATCGTCAAAGCAATAGTTTGCAGTCCAATAAAAAGGATTAGACCATGTGGAGCAATTCAACGAGGCGACTTATGGATGAATTTTGTGGGACCTGATAGGCACGGCAAAAAGAAAGTAGCCGTTGCTTTAGCTGAGATTTTGTATGGAAGTCGGGACAGCTTTATTTGTATGGATCTAGGTTCCAAAGAAATGAAAGCATCCAACGCTGTGAAATTTAGGGGAAAGACTACTCTTGATTTTATTGTGGGGGAGTTTTGCAAGAAAACTTTGTCTGTGGTTTTTCTTGAAAACGTAGATAAGGCAGATGCAGTAACTCAAAGCAGTTTGTTGCAAGCCATCAAGACTGGAAAAATAACAGACTCGCACGGTCGAGAAATCGGATTAAACAATGCCACATTTGTGACTTCGTTTTTAAATTACAAAGATAGTTTGACGTTAACAGAAGAACCTTCCAACTATCCTGAGGAAAGGATACTAATGGCAAAAAGAGGAGCTATCAAGATCAAAGTTGAGCATGCCATTGGAGACATCATATCTAACAGTCTGAGAGATGCTATGCCAGATCTAGTTTTTGTAAATAAACGAAAATTGATCGGTGATAATGAATTTCACCACGACCGGCATTTAATCTCAGATATGCCTAAAAGGGCACATATAGCATCAAATTGGCTTTTGGATTTGAATCTTCCAGCTGAAGAGAGTGAATCACAACAAATGGACAGTGAAAATTCCAAACATGTCTCAACTGGGAACCAAAACATTTGGTTGCAAGATTTGTGTGATCAAGCTTACCAAACGGTTGTTTTCAAACCTTTCAATTTTGATGCGCTGGAAGATAGAGTGTTAGAAGTGATTAGAAGTAACTTCAACAAGATTCTTGGATCAGAATGTGTCTTACAAATTCAGTCAGAAGTCATTGACCAGTTGCTCGCAGCAGCATATGTCTTGGACCAGGATACAGTGGTGAAGTGGGTGGAGCAAGTTCTGAGCGAAGGATTCATCGAAGTACAGAGAAGGTGCAACCCCACAGCTAGTTCAATTGTGAAACTTGCTTCATATCAAGATCAAGCTTTAAGTGTATACCTTCCACCAAGAATACTTTTGGATTGA 2808 0.4387 MAAIKRSQAKQRRHPDTFHNQLLFQSNHSNNLQQTQQPFSVSSVKVELQHLVISILDDPVVSRVFAEAGFRSSEIKLAILRPLPQLFRYSRSRGPPVFLCNLPEQGRRGGFFGFPFSGXGDGGEXESFRRIGEVLVRSKGRNPVLLGACAGEAMRQFVEAVEKRREGVLPVELVGLRIVSGIREAEEVAEKGVGPGVVVNLGDLKGFVAEEENXGGEEGVLGELGRLLKVHSERVWLIGFARSYESYLNFVGRFPFVEKDWDLQLLPITSLQSCQKPRSSLMDSFVPFGGFFSSPSDLKSPLPGCXPNLRHRQNSERCEQEVPAPKERFSSFAVEPCQSNYQPWLQIAEXNAAKGLNAKGFSEANSCPNVMGFLCTKDKKKDAENRDNKVTDNSPVEVIDLNSEVPVNVQIMSTSQPTSPFSLAFKEMQGKHTSKLVEMFQKAEDLELADLRSCNISNSSVCDGSEMSPTSVNSVTTDLGXGXCXSPTSNKFKKPXDEYSMXPPKQXGSQFSSNFNLADGNILNHXSQSSSCLSFDHVRQVDARNPKSLFEXLSKEVTWQEEALHAIVKAIVCSPIKRIRPCGAIQRGDLWMNFVGPDRHGKKKVAVALAEILYGSRDSFICMDLGSKEMKASNAVKFRGKTTLDFIVGEFCKKTLSVVFLENVDKADAVTQSSLLQAIKTGKITDSHGREIGLNNATFVTSFLNYKDSLTLTEEPSNYPEERILMAKRGAIKIKVEHAIGDIISNSLRDAMPDLVFVNKRKLIGDNEFHHDRHLISDMPKRAHIASNWLLDLNLPAEESESQQMDSENSKHVSTGNQNIWLQDLCDQAYQTVVFKPFNFDALEDRVLEVIRSNFNKILGSECVLQIQSEVIDQLLAAAYVLDQDTVVKWVEQVLSEGFIEVQRRCNPTASSIVKLASYQDQALSVYLPPRILLD* 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1040 935 MobiDBLite consensus disorder prediction 472 513 - -
Amo10g1040 935 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 933 - -
Amo10g1040 935 PANTHER PROTEIN SMAX1-LIKE 8 1 933 - -
Amo10g1040 935 Gene3D - 521 756 IPR027417 -
Amo10g1040 935 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 541 701 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1040 Amo-Chr10 20255974 20259714 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1040 - - gmx:100786125 1093.57