Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0894 ATGAAGCCAAACACCCAGGCTTCTTCCTTCGCCACTACTAAACCGCCGCACGTGACCTRCTTTCGCCGCTCACGTGCTCCCGTTCAACMAAACGACGCCGTGRGGACCGTGAAATGRCATCGTATCAACTTGTCCCTTCGCCACTCCAAGACCATAACCATAACTGCAGCCGCGAAGCCCGAGAATGACGGCGTAGCTGAAAACTCGGTCGGTCCGACCCGGCGAGTCGTGTTGGCGGCGCCATTTCTTGCCGCCGGCGCGTCGTTTKTGTTCTCGTCYGCAACGAGYGCGGATGATAAGGCTGTGACYGCGCCATCTCCTGTTTCGGCGCCTCCGCCTGCAGAATTGAKGGCGGCGAAGGTTGAGGAACCGAAGAAGAAGCAGAAYGAGGAGGAGGCGATAACGTCGAGGATTTACGACGCGACGGCGATCGGGGAACCGTTGGCAATAGGGAAGGACAAGGGGAAAGTGTGGGAGAAGCTGATGAACGCGCGCGTGGTGTATTTGGGGGAAGCGGAGCAGGTTCCGGTTCGCGACGACAAGGAATTGGAGCTCGAGATCGTTAAGAATTTGCAAAAGCGGTGCCTAGAGAATGAGAAGCGTTTGTCTTTGGCTCTTGAAGCTTTCCCTTCGAATCTTCAGGAACCGCTCAATCAGTTCATGGATAACAAGATAGATGGAGAAACCTTAAAGTCTTATACAATGCATTGGCCGCCTGAAAGATGGCAGGAGTATGAACCTCTTCTTAATTACTGTCGTGAAAATGGAATCCGCCTTGTTGCTTGCGGCACCCCACTATCGATCTTAAGGACTGTACAAGCAGAAGGAATTCGTGGYCTTTCAAAAGCTGATCGTAAAGTATATGCACCTCCAGCTGGTTCAGGCTTCATATCAGGCTTCACTTCTATCTCACGTAAATCATCAGTTGATAGTATTCTAAATCCATCAGTTCCTTTTGGTCCAAGCTCATATCTTTCTGCACAAGCTAGAGTTGTAGAGGAGTATAATATGTCCCAGATCATCTTACAAAATGTGCTTGATGGAGGAGCATCGGGCATGTTAGTAGTTGTGACTGGTGCAAGCCATGTAACATATGGTTCTAGAGGAACTGGAGTGCCAGCAAGAATTTCAGGAAAAATACAYAAGAAAAACCAAGTTGTAATATTGCTTGACCCTGAAAGACAGTTCATTCGTGGAGAGGGAGAAGTTCCTGTTGCTGATTTTTTGTGGTATTCTGCTGCCAGACCCTGTAATAGAAATTGCTTTGACCGTGCTGAGATTGCTCGGGTTATGAATGCTGCTGGGCGCAGACGAGATGCCCTRCCACAGGATCTACAAAAGGGAATTGATCTTGGTTTGGTATCACCAGAGGTATTGCAGAACTTCTTTGACATAGAGAAGTATCCCTTAATTTCAGAACTCACTCACCGTTTCCAGGGTTTCKGGGAAAGATTGTTGGCAGACCCCAAATTCTTGCATAGATTAGCCATAGAAGAAGCTATATCGATAACAACTACTCTAATAGCACAGTATGAAAAGCGGAAAGAAAATTTTTTCCAGGAACTAGACTATGTTATCACAGACACTGTCAGAGGATCAATTGTTGATTTTTTTACAGTGTGGCTTCCTGCACCAACTCTGTCATTCCTTTCATATGCTGATGAGGCAAATGCACCTGAAAACATTAATTCACTAATAGGTCTTCTGGGCTCCATCCCAGACAATGCATTTCAAAAGAATCCAGCAGGGARAAACTGGAATCTCAATCATAGAATTGCATCAGTTGTATTTGGTGGTTTAAAACTTGCCGGTGTTGGATTTATTTCAAGCATAGGTGCTGTGGCTTCATCAAACTCTCTATATGCAATTCGTAAATTACTTAATCCGGCTGTCGTTACTCAACAACAGATTGTGAGGTCACCAATACTCAAAACAGCYGTTGTTTATTCATTATTTCTTGGAATCTCGTCAAATCTCCGATACCAGGTAATTGCTGGGTTAGTGGAGCATCGCCTTTCTGAACAGTTTGCATCCCAAACCTTGTTTGTAAATATGGTATCGTTTGTCGCACGGACAGTCAATTCTTATTGGGGAACCCAGCAATGGATTGACATTGCCCGCGCTACTGGTCTGCAAGTTAGAAAGACAGAGTTACCTACATCAGATCCTCCAAATAATGCAGCAATTGTTTGCYGCGAAACAGAAGAAGCCAGCATTGATGAGATAAAAGAATAA 2235 0.455 MKPNTQASSFATTKPPHVTXFRRSRAPVQXNDAVXTVKXHRINLSLRHSKTITITAAAKPENDGVAENSVGPTRRVVLAAPFLAAGASFXFSSATSADDKAVTAPSPVSAPPPAELXAAKVEEPKKKQNEEEAITSRIYDATAIGEPLAIGKDKGKVWEKLMNARVVYLGEAEQVPVRDDKELELEIVKNLQKRCLENEKRLSLALEAFPSNLQEPLNQFMDNKIDGETLKSYTMHWPPERWQEYEPLLNYCRENGIRLVACGTPLSILRTVQAEGIRGLSKADRKVYAPPAGSGFISGFTSISRKSSVDSILNPSVPFGPSSYLSAQARVVEEYNMSQIILQNVLDGGASGMLVVVTGASHVTYGSRGTGVPARISGKIHKKNQVVILLDPERQFIRGEGEVPVADFLWYSAARPCNRNCFDRAEIARVMNAAGRRRDALPQDLQKGIDLGLVSPEVLQNFFDIEKYPLISELTHRFQGFXERLLADPKFLHRLAIEEAISITTTLIAQYEKRKENFFQELDYVITDTVRGSIVDFFTVWLPAPTLSFLSYADEANAPENINSLIGLLGSIPDNAFQKNPAGXNWNLNHRIASVVFGGLKLAGVGFISSIGAVASSNSLYAIRKLLNPAVVTQQQIVRSPILKTAVVYSLFLGISSNLRYQVIAGLVEHRLSEQFASQTLFVNMVSFVARTVNSYWGTQQWIDIARATGLQVRKTELPTSDPPNNAAIVCXETEEASIDEIKE* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0894 744 Gene3D - 125 415 - -
Amo10g0894 744 PANTHER PROTEIN RETICULATA-RELATED 5, CHLOROPLASTIC 15 743 - -
Amo10g0894 744 Pfam Protein RETICULATA-related 483 667 IPR021825 -
Amo10g0894 744 Pfam Haem-binding uptake, Tiki superfamily, ChaN 157 376 IPR007314 -
Amo10g0894 744 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 15 743 - -
Amo10g0894 744 SUPERFAMILY EreA/ChaN-like 155 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0894 Amo-Chr10 14439982 14447082 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0894 - - gmx:100810366 1130.16