Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0893 ATGTCATCTTCCCATTCCCAAAACATGAAAATAGGCATAGTGGGTTTCGGCACCTTCGGACAGTTTCTTGCAAAGACAATTATAAAACAAGGCCACACTATAACGGCAACTTCTCGATCAGATTACTCCCATCTCTGCCTCCAAATGGGTATCCATTTTTTCAGGGATATGAGTGCATTCCTTGATGCTGGGAACGATGTAATACTGTTATGCACATCGATCTTATCGCTAGCGGAAGTTATGAGGTCAATGCCACTCACRTGTCTGAAGCGACCAACGCTCTTTGTTGATGTCCTTTCGGTCAAAGAACATCCTAGAAACCTTCTACTCCGAACGTTGCCAGGGGAGTTAGACATACTGTGCACGCACCCAATGTTTGGACCAATCAGTGGGAAGGATGGGTGGAAAGATCTCACTTTCATGTATGACAAAGTTCGAATTCAAGATGAAGCCAAATGCTCTCGTTTCCTCCAAATTTTTGAAACTGAGATAAAAGTTAAAAAATCGAATGATGATGACCCAAACCTGGTGATGAATTCAAGCAAGGTCAATTATTATTTTCGCATGTACATTGTATGTATTACACAGGGTTGCAGGATGGTAGAAATGTCCTGTGAGGAACATGATAAAGCAGCTGCTAGGAGCCAATTTATCACACACACAATAGGCAGGTACATGAAGGAGACCACCATGAAATGTAGTTTTGATCTGTACAGTGGATTGTTCACGCATAACAGATTTGCCATACAAGAGCTGGAAAACCTTGAGCATGCCTTGTTCAAGGTCAAAGAGATGCTGGTTCAAAMGATGAAAGAGGAGCAGGGTCAAGAAAAAACTGAAAGTTGA 846 0.4196 MSSSHSQNMKIGIVGFGTFGQFLAKTIIKQGHTITATSRSDYSHLCLQMGIHFFRDMSAFLDAGNDVILLCTSILSLAEVMRSMPLTCLKRPTLFVDVLSVKEHPRNLLLRTLPGELDILCTHPMFGPISGKDGWKDLTFMYDKVRIQDEAKCSRFLQIFETEIKVKKSNDDDPNLVMNSSKVNYYFRMYIVCITQGCRMVEMSCEEHDKAAARSQFITHTIGRYMKETTMKCSFDLYSGLFTHNRFAIQELENLEHALFKVKEMLVQXMKEEQGQEKTES* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0893 281 Gene3D - 1 167 - -
Amo10g0893 281 PANTHER AROGENATE DEHYDROGENASE 1, CHLOROPLASTIC-LIKE 193 228 - -
Amo10g0893 281 Coils Coil 270 272 - -
Amo10g0893 281 Pfam Prephenate dehydrogenase, nucleotide-binding domain 24 137 IPR046826 -
Amo10g0893 281 PANTHER AROGENATE DEHYDROGENASE-RELATED 3 163 IPR045011 GO:0006571|GO:0033730
Amo10g0893 281 PANTHER AROGENATE DEHYDROGENASE-RELATED 226 278 IPR045011 GO:0006571|GO:0033730
Amo10g0893 281 PANTHER AROGENATE DEHYDROGENASE-RELATED 193 228 IPR045011 GO:0006571|GO:0033730
Amo10g0893 281 Coils Coil 252 268 - -
Amo10g0893 281 ProSiteProfiles Prephenate/arogenate dehydrogenase domain profile. 9 281 IPR003099 GO:0004665|GO:0006571|GO:0008977
Amo10g0893 281 PANTHER AROGENATE DEHYDROGENASE 1, CHLOROPLASTIC-LIKE 3 163 - -
Amo10g0893 281 PANTHER AROGENATE DEHYDROGENASE 1, CHLOROPLASTIC-LIKE 226 278 - -
Amo10g0893 281 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 161 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0893 Amo-Chr10 14439519 14441330 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0893 K15227 - gmx:100787362 353.599