Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0889 ATGGCAAATGTGGTGGAGTTGAAAGTTGGTTTGCACTGTGACGAGTGCATCAAGAAGATTCTCAAGGCCATCAAGAAAATTGAAGATATTGAAACGTATAATGTGGACACGGAGATGAACAAGGTAACTGTTACGGGGAACGTTACAAGAGAAGAAGTGATCAGAGTTCTTCACAAGATTGGGAAGAATGCTGCTGTTTGGGAAGATGATACTCAAACCAACAAGTGA 228 0.4123 MANVVELKVGLHCDECIKKILKAIKKIEDIETYNVDTEMNKVTVTGNVTREEVIRVLHKIGKNAAVWEDDTQTNK* 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0889 75 ProSiteProfiles Heavy-metal-associated domain profile. 10 66 IPR006121 GO:0046872
Amo10g0889 75 Pfam Heavy-metal-associated domain 8 62 IPR006121 GO:0046872
Amo10g0889 75 SUPERFAMILY HMA, heavy metal-associated domain 3 68 IPR036163 GO:0046872
Amo10g0889 75 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 2 74 IPR045181 GO:0046872
Amo10g0889 75 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 2 74 - -
Amo10g0889 75 Gene3D - 2 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0889 Amo-Chr10 14405806 14406646 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0889 - - soe:110795187 121.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g1328 20 28149401 28150364 Amo10g0889 10 14405806 14406646 hybridization