Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0641 ATGCGGTTGCTCCTTTCGTCGTCACACGAGCTCTCTCGGCCGTGCTCTTGTCTTACGAGCTCCATCCGCCACCGCTCTCGCGCTGCTTCTTCTCTCCTCGCCGGAGGTTTGTCATCGGCTGGGAATGGGGAACTTGTAGTTGTGGACTCTAATGATCAAACTAAGCTTAAACATGAGGATCAGAAGACTCTTCGTAGAATGGCTCAGAATTATGAGGCTGCTAGGAAGAGTCGATTGAGGAAGAAGGTAAATTAA 255 0.502 MRLLLSSSHELSRPCSCLTSSIRHRSRAASSLLAGGLSSAGNGELVVVDSNDQTKLKHEDQKTLRRMAQNYEAARKSRLRKKVN* 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0641 84 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 65 80 IPR004827 GO:0003700|GO:0006355
Amo10g0641 84 PANTHER TRANSCRIPTION FACTOR TGA9 41 83 - -
Amo10g0641 84 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 41 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0641 Amo-Chr10 7808805 7809836 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0641 37 82 bZIP Transcription Factor Family AT1G68640 56.522 6.03e-10 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0641 K14431 - aip:107637913 84.3445