Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0562 ATGGCAGCAACAATAGCAACAATGGCCATGGTTAATGCAAAGTTCCTTAACACAAACTCACCCAAGTTTCCAAAGCCCACATCTTCTTCTTCAAGGCCCGCTTTTTCCCTCCTTTCCCTTGAGAACCTCCCAAAGGGACTTGCCACCACAAAAAGCTCCAATCCCGTCAACCTTTCAACTTCCATGGCAGGAACTGCCATAGCTGGTGCTATCTTCTCCACCCTTGGAGCCTCCGACGCCGCCTTCGCGGCACAGCAAATCGCCGACATAGCAGACGGCGACAACCGTGGGCTTGCACTGTTGCTGCCCATAATTCCGGCAATTGCATGGGTTCTTTTCAACATCCTGCAGCCAGCACTTAACCAGCTGAACCGCATGAGGAGCAGCAAAGGGGTCATTGTTGGGCTTGGGCTTGGGCTTGGTGGGCTTTCAGCATCAGGGATTTTGTGGACACCCGAGGCATCAGCGGCAGTTAGCAATGCTGCTGATGCTGCGAGTGACAACAGGGGTCAGCTTCTACTGTTTGTTGTGGCACCTGCAATTCTTTGGGTTCTTTACAATATCTTGCAGCCTGCTTTGAACCAACTCAACAGGATGAGATCTCAGTGA 609 0.5172 MAATIATMAMVNAKFLNTNSPKFPKPTSSSSRPAFSLLSLENLPKGLATTKSSNPVNLSTSMAGTAIAGAIFSTLGASDAAFAAQQIADIADGDNRGLALLLPIIPAIAWVLFNILQPALNQLNRMRSSKGVIVGLGLGLGGLSASGILWTPEASAAVSNAADAASDNRGQLLLFVVAPAILWVLYNILQPALNQLNRMRSQ* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0562 202 Pfam Photosystem II protein Y (PsbY) 94 126 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Amo10g0562 202 Pfam Photosystem II protein Y (PsbY) 167 199 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Amo10g0562 202 Hamap Photosystem II protein Y [psbY]. 94 128 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Amo10g0562 202 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 202 IPR038760 GO:0009523
Amo10g0562 202 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 202 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0562 K02723 - zju:107428525 231.491