Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0550 ATGTCGGAAGCTGATTCGGATTCAGGTTCCAATAACGGGCACGACCATGCACCAAATGGGGATTCTGAATCTACCACTTCGGTTGCAATTAATCAGGGTGGTGCCAATGATGGGGAAGATGGAATGTTTGTTGATTGCCCTGATGAGCTTATCACAATGGATAGTAGGCCAAGTGATAATAGCAACGAAGAAGGAGCTGCCGGGGACGATGATAACGGAGAAGAGGTGATTCAAGTTGTGCATCAAGAGGGTCATTTTGGTGAGTTGGGCTCAGCAGGTGAGGTGGAGCAGCTGCGTCGTTCGCTGGAGCTGCATCAGGAAGAAAGAGAAGCCATTGCGCAGGGGGTGATTGATCTTCATTTGCAGCTGAAGGCTTTGAGTTCTCCGAAGTCAGTGCCGTATGAAGGTGAGGATGGAGTTCGCGAGGTGGTGGATGTTCCATTGAAGGAGATGATAAAAGAATCTTTGGAGTTAGTGAAAACTGCTTCGGAGGATTGGCCCAAAGTTTCCAACGATAGTTTGCAAGTTTCATCAGAGGCTCAGCTTGAGAAGGATCATAATATTGAGATTGCATTGGATAAGATGATATCCTCTCTTGGAGCAGTTGTTGATCCATGGCAATTATCAGATCATTCTGTAAGTGGGAAAATATTTTATATCGAGGAAGGAACTACACTTTTGATTGAGAAGTACAATCAGATTCTTTCTGAAATTTATCAACTCGGGCAGTCTTTCTCTGAGGTTGGCTTAGAGCAAGAACATGGGAACATACTTCTTGATGCTCGTGGTGGGTTACTGCATTTCAAACGAAAGGAATCAGAATTTGTTGAAAAACTGGCTCAGTTAGAAGATGAAAACCGAAAACTTGTTGAAGAGCTTGAGAAGGAAAGGGTGATGATAGGGGAACTAAACTCTGAACTTGGAAATACGAAAGCAGAACTTGAGCAGGAAAAGGTTAAATGTGCTAATACCAAAGAGAAGCTAAGTATGGCTGTGACGAAAGGAAAGGCATTGGTACAGCAGCGAGACACTCTAAAGACATCGCTGGCTGAAAAATCCAGTGAGCTGGAGAAATGTTTAACTGAGTTACAGGAGAAGTCCCTTGCACTAGAAGCTGCTGAATTTATTAAGGAAGAGTTGGCTCGAAGAGATAGTGTGGTTGAATCCCTACAGAACTCATTACTACAAAATAGTACCATTTTTGAACAAGTAGAAGAAATCTTGTCTCATGTAGAACTTGATCGGCATGAAATATCTGACGTGACAGAGAAAGTTAGATGGCTCGTGGATGACAGAAATGTGCTTAAGGATGCTGTTCAGGAGTTACACAAATTGAAAGATACTCTATCTCTAGTGGACCTACCAGAACATGTCTCATCATCTGATTTGGGATCTCAAATGAATTGGCTGAGGGATTCTTTTCATATGGCTAGGGATGATAATCGTGTTTTGCAGGAAGAAATTTCTAAAATAAATGAAGCATCCTCTAACCATATTGATCGCTTGAGCATTTCGCTTTTGCTGGAATTACAGGAAAAAGATTACCTTCAGTCAGAATTAACTGATTTGAGGTTCAAATACGAGGAGCTTGTTGGCATGAATCGTCATCTTTCCTTGGAGAAGGATCAAATGGTGAAGATGTTGGTTGAGCTTTCTGGGGTAAACCTGGAAGATGAAGGGATTGATAAATCCCCTTCTAGCACTACTATGATAATTGATTTATGCTTTCGCAAATTAAAAGAACTGAATGGTCCTGCCTCTAGCACATCTAATATTGATTCTGAGCTGTTTGAAAGGATTCAGAGTTTCTTATATGTTAGGGACCAAGGTTTAATTCTCTATGAGGACATACTGGAAGAAGAGATGGTTATCAGATCTGATATGAGTAAGCTATCAAATGAGTTGAAAGTGGCGTCCGAGGAAATTACAGCACTTAAAGAAGAAAGGAGCTCTCTAATGAAAGATCTTGAACGATCAGAAGAGAAGTCATCCATGCTTAGAGATAAGTTGTCCATGGCAGTTAAGAAAGGAAAGGGGTTGGTTCAAGATAGGGACAATCTAAAAGGTCTTATAAATGAAAAGGACTCGGAAATAGAGCAATTGAGGATTGATTTGCAGAAGCAAGAATCTGCAGTTTCAGAATACATGGATCAGATCAATAGATTGTCCAGTGAAGTGCAAAACATCCCCAAGTTACAGGCTGATCTTCTGGAAATGGAAAGGGAAAGGAATCAGTTTGAGCAGCTCTTGACAAAGAGCCGAAACATGTTACAAACAGTGATGGAATATATTGATGGTATTGCTCCTTCAGTTGATCCAGTCTTTGATGAACCTGTGGAAAAGGTAAAATGGTTTGCTGGTTATGTCAGTGAATGCCAAGATGCTAAAGTACATGCAGAACAAGAGTTGCAAATTGCAAAGGAGGAAGCCACTATACTGGAAACCAAATTAGCAGAAGCCCAAGAAAATATAAAATCCCTTGAACGGGGATTATCTTCATTAGAGGAGAGTGTTTCTCAACTTGCTGAGCAAAAGAAAGAGTTAGAACATGAAAAATCAAGAGTTGGGGTGGAGTTAGAGAAGTTTAAAGAAGATGTTGCTGATGCTTGTAGCACTACTCGGTCACTTGAAGATGCCTTATCGCAGGCAGAAAAAGATATATCTGTTCTTTCCAGTGAAAAGGAGCAGGCTCAAGCTGGTAGAGTTGCTGCAGAGATGGAGTTAGAGAGAGTTAAAGATGAAACAATGCAGAAGATAGCCGAACTAGCAGAGGCCAGCAGGACCATAAAAGATCTGGAAGATAAACTATCTCAGGTTCAGACTAATGTCAATTTATTGACTGAAAATTATAATGCTGATCAAGCTGTCAAGACTGATATGGAAAATGAACTGAAGAAGTTGCAAGATGAAGCTGCAAATCATGCTAGAAAATTGGTAGATGCCTCTGATACTATAAGATCACTGGAAGATGAATTAGTAAAGGCACAAGATAATGTTTCTTCTTTAGAGGATGCAAATAAAATGGCTAAAGAGGAGATATCGTCTCTTGGTTTTAAGTTAAAGTCATGCATGGACGAGCTAGCTGGAAGGAGTGGCAACTTGGAGAACAAGTCTGTAGAGCTCATTGGAATCATTAGTGATCTTCAGGTGCTTATGAAAAACAATATTCTATTTCCCAGAGTCAAACGATGTTTTGAGAGCAAATTTGAGACCCTGAAGAATATGGATCATGTGCTGAATAAAATAAGAGGTCATATTGTTTCCATGGCTGCTAAGGATCTTGAAGGACACTCTATGAAGGAGGAAAATCTGCATATGAGAGAAGAATTACTGGATAGCCTTGAAAATTTTGATGTTGAACTGGATAACAGAGAGATGAATGGCGCCGATATTGACACCGTAGTTTCATCATTTTCAACAATTGTGAAAGGATTTCAGTTGAGAAACAAACACATTGCAGAAAAGTTTGATGAACTTTCTAATTCCATTGATGAATTTACTTCCCCTCTCCATGAAAAGCTGCTGGATACAGAAACCAAAATATTGACTGTTGTTGAGAACATGCAAACTATGAAAGAGAAAGAAAATACTATCGAGAAGTTACTGGAAGAAAAGGACAATATTATTTCCTCTTTGGAGAATGATATTGGTGTGTTGCTTTCTGCATGCACTGATGCTACTGGTGAACTCCAGTTTGAAGTTGACAAGAGTCTTCAGCAACTGGGCTCTATATCTGAGGTTGAAGATTTAAACCATGAAACCGATGAGCAAGCAGAGCATCATAAGGACAGAATATATGCCGAAGCCTCACAAAAGTTGAAAAATGCTTCTAGAAAAGCCCAAACTTTGATTAGACATTTTGAAAATCAAAGTGAGCATGTAGCTGTAGCCATTGAAAATTTGGAGATTAAGCTGAAAGAAACAACCGCTGCTTTTGAAAGGACCCTAGATGAAAGAGACGCAAACACTGCAAGAATTGAAGGTTTGCAGATTGAATTGAAAGAAATAAAAGATTCTCTTGAAAGGGCCACAAATGAAAGAGATGCAAACGCTGCAAAAATTGAAGCTTTGCAGAATAAGTTGAAAGAAACAACAGCTACTTTTGAGATGCTCAAAGATGAAAGAGGCTTAAACACTTCAATTATTGAAGATTTGCAGAATAAATTGAATGAAACAACAGCCGCTTTTGAAAAGACCGCGGAAGAAAGAACCGTAAATTCTGCGAAAATTGAAGATTTGCAGAATAAATTGAAAGAAACAACAGCTGCTTTTGAAATGGCCATAGATGAAAGAGACATAAACAGAAACAGAGTTTTGCAACTAGAGTCTGATGTTCAAGAACTGCAAAGTTCTTGCAATGAGCTTAGGAATAATTTAGAGGGTCATCATGCTCTAGAAGAAAAGTTAAAGGAAAAAGAGGCAGAGATTTTATCACTGAACAGTACTTTGTCAGCAAAAGAAAAAGTTGCAGAAAGATCCCTTCTTTCAGCATCCCAGGTGAGAGATCTATTTGACAAGGTAGATGGTATTGAAATCCCTATTTTAGAGTCTGAAGAAAATTATGGTGAGCTTCATACTTCAGCCCCTGCAAAGAAGCTCTTCCACATTGTTGATAGCGTTACTAAGTTGCGCAATCAAATAAACTCCTTGTATCATGATAAAGAAGAGCTTCAATCATCTCTCGAAACTAAGGATCTTGAAATTAAGAATCTGAAGGAGGAAGTCAAACAGCTCAATAGAAATTGGGAAGACTCGAAAATGGCCAAGAATGATTTGTCCGACATCACCTTCGCTTTAGAAAAAGTTTTGGATATTTTGGGTGCTGGTGATTGGGTTGTGGATAGAAAATCAACAGGTTTGAAGGAATTAATATCGGCATTAGAAAAGCATATCAGGGCCATTCTTTTAGAATCTGAAAATTCAAGGTCGAAAGTGCAGGAACTTGGTATTAAGTTGGTAGGAAGTCAGAAGTTTATTGATGAATTAACAACTAAGGTTAAATTACTTGAAGGTTCGCGCAAAGATAAGACTTCTCAGCCAGAGGCTGTCCAGCAAAGGAGCCTATTCGACGCATCCTCATCCTCACTAGTTGCTGGGGCTGAGATAACCGAAGTTGAAGAAACGGGACTGCTAGGCAACAATGCATTATTTCCAGTTTCTTCCGCTGCTAACGTGCGAAATATGCGAAAAGGATCATCTAGTGACCATCTTGCACTTGAAATCGGTGGGGAATCTGATGCTTTAATGAAGAGCACTGATACTGATGATGACAAAGGTCATGCATTTAGGTCTCTGAACACTTCTGGACTTGTACCAAAACAAGGAAAGCTCATTGCTGATCGTATCGATGGATTCTGGGTATCCGGTGGTCGGATTCTGATGAATCGACCAAGAGCAAGATTAGGACTCATCGGATATCTGCTACTCTTGCATATATGGCTACTGGGGACCATCTTGTAG 5460 0.3976 MSEADSDSGSNNGHDHAPNGDSESTTSVAINQGGANDGEDGMFVDCPDELITMDSRPSDNSNEEGAAGDDDNGEEVIQVVHQEGHFGELGSAGEVEQLRRSLELHQEEREAIAQGVIDLHLQLKALSSPKSVPYEGEDGVREVVDVPLKEMIKESLELVKTASEDWPKVSNDSLQVSSEAQLEKDHNIEIALDKMISSLGAVVDPWQLSDHSVSGKIFYIEEGTTLLIEKYNQILSEIYQLGQSFSEVGLEQEHGNILLDARGGLLHFKRKESEFVEKLAQLEDENRKLVEELEKERVMIGELNSELGNTKAELEQEKVKCANTKEKLSMAVTKGKALVQQRDTLKTSLAEKSSELEKCLTELQEKSLALEAAEFIKEELARRDSVVESLQNSLLQNSTIFEQVEEILSHVELDRHEISDVTEKVRWLVDDRNVLKDAVQELHKLKDTLSLVDLPEHVSSSDLGSQMNWLRDSFHMARDDNRVLQEEISKINEASSNHIDRLSISLLLELQEKDYLQSELTDLRFKYEELVGMNRHLSLEKDQMVKMLVELSGVNLEDEGIDKSPSSTTMIIDLCFRKLKELNGPASSTSNIDSELFERIQSFLYVRDQGLILYEDILEEEMVIRSDMSKLSNELKVASEEITALKEERSSLMKDLERSEEKSSMLRDKLSMAVKKGKGLVQDRDNLKGLINEKDSEIEQLRIDLQKQESAVSEYMDQINRLSSEVQNIPKLQADLLEMERERNQFEQLLTKSRNMLQTVMEYIDGIAPSVDPVFDEPVEKVKWFAGYVSECQDAKVHAEQELQIAKEEATILETKLAEAQENIKSLERGLSSLEESVSQLAEQKKELEHEKSRVGVELEKFKEDVADACSTTRSLEDALSQAEKDISVLSSEKEQAQAGRVAAEMELERVKDETMQKIAELAEASRTIKDLEDKLSQVQTNVNLLTENYNADQAVKTDMENELKKLQDEAANHARKLVDASDTIRSLEDELVKAQDNVSSLEDANKMAKEEISSLGFKLKSCMDELAGRSGNLENKSVELIGIISDLQVLMKNNILFPRVKRCFESKFETLKNMDHVLNKIRGHIVSMAAKDLEGHSMKEENLHMREELLDSLENFDVELDNREMNGADIDTVVSSFSTIVKGFQLRNKHIAEKFDELSNSIDEFTSPLHEKLLDTETKILTVVENMQTMKEKENTIEKLLEEKDNIISSLENDIGVLLSACTDATGELQFEVDKSLQQLGSISEVEDLNHETDEQAEHHKDRIYAEASQKLKNASRKAQTLIRHFENQSEHVAVAIENLEIKLKETTAAFERTLDERDANTARIEGLQIELKEIKDSLERATNERDANAAKIEALQNKLKETTATFEMLKDERGLNTSIIEDLQNKLNETTAAFEKTAEERTVNSAKIEDLQNKLKETTAAFEMAIDERDINRNRVLQLESDVQELQSSCNELRNNLEGHHALEEKLKEKEAEILSLNSTLSAKEKVAERSLLSASQVRDLFDKVDGIEIPILESEENYGELHTSAPAKKLFHIVDSVTKLRNQINSLYHDKEELQSSLETKDLEIKNLKEEVKQLNRNWEDSKMAKNDLSDITFALEKVLDILGAGDWVVDRKSTGLKELISALEKHIRAILLESENSRSKVQELGIKLVGSQKFIDELTTKVKLLEGSRKDKTSQPEAVQQRSLFDASSSSLVAGAEITEVEETGLLGNNALFPVSSAANVRNMRKGSSSDHLALEIGGESDALMKSTDTDDDKGHAFRSLNTSGLVPKQGKLIADRIDGFWVSGGRILMNRPRARLGLIGYLLLLHIWLLGTIL* 1820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0550 1819 Gene3D Nucleotidyltransferases domain 2 1375 1510 - -
Amo10g0550 1819 PANTHER BNAA09G28150D PROTEIN 35 856 - -
Amo10g0550 1819 PANTHER BNAA09G28150D PROTEIN 954 1007 - -
Amo10g0550 1819 PANTHER BNAA09G28150D PROTEIN 1011 1370 - -
Amo10g0550 1819 PANTHER BNAA09G28150D PROTEIN 898 949 - -
Amo10g0550 1819 PANTHER BNAA09G28150D PROTEIN 1358 1819 - -
Amo10g0550 1819 Gene3D - 614 775 - -
Amo10g0550 1819 MobiDBLite consensus disorder prediction 1 33 - -
Amo10g0550 1819 Coils Coil 346 366 - -
Amo10g0550 1819 Coils Coil 1326 1374 - -
Amo10g0550 1819 Coils Coil 1382 1402 - -
Amo10g0550 1819 Coils Coil 1540 1588 - -
Amo10g0550 1819 Gene3D - 803 1023 - -
Amo10g0550 1819 Coils Coil 729 756 - -
Amo10g0550 1819 Coils Coil 684 725 - -
Amo10g0550 1819 MobiDBLite consensus disorder prediction 1 71 - -
Amo10g0550 1819 SUPERFAMILY Tropomyosin 860 1024 - -
Amo10g0550 1819 Coils Coil 1438 1489 - -
Amo10g0550 1819 PANTHER - 954 1007 - -
Amo10g0550 1819 PANTHER - 1011 1370 - -
Amo10g0550 1819 PANTHER - 35 856 - -
Amo10g0550 1819 PANTHER - 1358 1819 - -
Amo10g0550 1819 PANTHER - 898 949 - -
Amo10g0550 1819 Coils Coil 95 115 - -
Amo10g0550 1819 Coils Coil 873 1012 - -
Amo10g0550 1819 Coils Coil 1298 1318 - -
Amo10g0550 1819 Coils Coil 1266 1286 - -
Amo10g0550 1819 Coils Coil 1184 1211 - -
Amo10g0550 1819 SUPERFAMILY Methyl-accepting chemotaxis protein (MCP) signaling domain 626 835 - -
Amo10g0550 1819 Coils Coil 628 662 - -
Amo10g0550 1819 Coils Coil 789 865 - -
Amo10g0550 1819 Coils Coil 272 331 - -
Amo10g0550 1819 Coils Coil 1410 1430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0550 Amo-Chr10 5954685 5962235 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0550 - - ccaj:109802875 2079.29