Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0514 ATGGCCGCAAGAACGGTTACGAAAGACATAATCACCCTACGTGGTTCTGCAGCAATTGTTAGCGAGTTCTTCGGATATGCTGCTAACAGCATCCTTTACAACCGAGGAGTGTATCCAGAAGAAAGCTTTGTGAAGGTGAAGAAATACGGTCTCCCAATGTTGCTTACTGAAGATGAGGGTGTCAAATCTTTTATAGCCAATTTAACTGCTCAGCTCTCTGAATGGCTTGAAGCTGGAAAGTTGCAGAGGATTGTCCTTGTTATAATGAGCAAGGCCACCGGTGAAGTCCTTGAAAGGTGGAACTTCAGCATTGAGACCGATAGCGAGGTTGTCGAGAAGGGTGTATCAAGGGAAAAGAGTGACAAAGAAATTATGAGAGAGATACAAGCAATTATGAGGCAGATTGCTTCAAGCATCACCTATTTGCCTTGCCTGGATGAACCTTGTGTTTTTGATGTGTTAGCATACACTGACAAGGATCTTGCAGTCCCATTCACTTGGATTGAGAGTGATCCAAAACTTATTGCGAATCCACAAATGGTGAAGTTGCATTCCTTTGACACCAAGATTCACAAGGTTGATACACTTGTATCTTACAAGAACGATGAATGGGATGAGTAG 621 0.43 MAARTVTKDIITLRGSAAIVSEFFGYAANSILYNRGVYPEESFVKVKKYGLPMLLTEDEGVKSFIANLTAQLSEWLEAGKLQRIVLVIMSKATGEVLERWNFSIETDSEVVEKGVSREKSDKEIMREIQAIMRQIASSITYLPCLDEPCVFDVLAYTDKDLAVPFTWIESDPKLIANPQMVKLHSFDTKIHKVDTLVSYKNDEWDE* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0514 206 PANTHER MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2 1 205 IPR045091 -
Amo10g0514 206 SUPERFAMILY The spindle assembly checkpoint protein mad2 10 203 IPR036570 -
Amo10g0514 206 Gene3D HORMA domain 1 203 IPR036570 -
Amo10g0514 206 ProSiteProfiles HORMA domain profile. 14 197 IPR003511 -
Amo10g0514 206 Pfam HORMA domain 16 191 IPR003511 -
Amo10g0514 206 PANTHER MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2A 1 205 IPR027097 GO:0007094
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0514 Amo-Chr10 5266726 5268565 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0514 K02537 - gmx:100789307 401.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0942 20 15720458 15722288 Amo10g0514 10 5266726 5268565 hybridization