Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0410 ATGGAATTCACTCAGAGTGACTTTGATCGCTTACTGTTGTTCGAGCACACGCGAAAAACCGCTGAAGCAAAGTATGCAGCAAACCCTCTTGATGCTGATAATCTGACAAAATGGGGAGGAGCTTTGATTGAGCTGTCAGCGTTCCAGGATCCCAGGGATTCAAAGAAAATGATCGATGATGCAATTTCAAAGCTGGACGAGGCTTTGCTGATTGATCCAGCAAGGCATGCCACTCTTTGGTGCTTGGGAAATGCCCACACGTCTTATGCATTCCTAACTCCTGATTTTGACGCTGCAAAGGTTAATTTTGACAAGGCACGTGAGTGTTTCCAGAGAGCTCTTGATGCGGATCCTGAGAATGAGCTTTATAAGAAGTCCTTGGAAGTTACTGATAAGGCCCCATTATTGCACATGGAGATCCACAAAAATGGGCTTGGTCAGATGACTGGTGGTGGGGCTTCCTCTACACCCTCAAAAAGAAAGGAATCAGCAAAGCAGAAGAGCAGTGACCTCAAGTATGATATATTTGGATGGGTGATTCTTGCAATCGGTATAGTCGCATGGGTGGGAATGGCCAAATCTCAAGATGATTTCACCTTTTCGGTGAGAGGAATAGAGGACGAGGCGATGGCGGACTGGATCCTGAACGATATCTTCACCAAATTGAAGGATTACTGGAGCATAGGAAATTATTGGGCGATCCCAAGATCAAGTAGAGTCGCAAACCTCGTTGGAGCAAGGTCTTCCAGAGGACACACACGAGGAAGAAACCATAGCAAGTGGGTTGGAAAGCAGTCTGAGGGCACATTTATTAAGTTCGACAATAGGCTAGGCAAAGCCCAGGAGGAGCGTGCTCAAATTGTATAG 867 0.4625 MEFTQSDFDRLLLFEHTRKTAEAKYAANPLDADNLTKWGGALIELSAFQDPRDSKKMIDDAISKLDEALLIDPARHATLWCLGNAHTSYAFLTPDFDAAKVNFDKARECFQRALDADPENELYKKSLEVTDKAPLLHMEIHKNGLGQMTGGGASSTPSKRKESAKQKSSDLKYDIFGWVILAIGIVAWVGMAKSQDDFTFSVRGIEDEAMADWILNDIFTKLKDYWSIGNYWAIPRSSRVANLVGARSSRGHTRGRNHSKWVGKQSEGTFIKFDNRLGKAQEERAQIV* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0410 288 Gene3D Tetratricopeptide repeat domain 1 150 IPR011990 GO:0005515
Amo10g0410 288 SUPERFAMILY TPR-like 22 125 IPR011990 GO:0005515
Amo10g0410 288 PANTHER MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20-1-RELATED 1 195 IPR010547 GO:0005742|GO:0045040
Amo10g0410 288 MobiDBLite consensus disorder prediction 144 165 - -
Amo10g0410 288 Pfam Plant specific mitochondrial import receptor subunit TOM20 8 193 - -
Amo10g0410 288 PANTHER MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20-2 1 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0410 Amo-Chr10 4198927 4209144 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0410 - - jre:109014566 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0891 20 14742444 14746484 Amo10g0410 10 4198927 4209144 hybridization