Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0013 ATGAATATGAATGTTATCTTATTAGCCCTTATTTTTTTCTTCTTCATGTGGACAATGTGTTTTGCCCAAAATACCCCTGAAGACTTCCTTTCAGTTCACAATGAGGCTCGTGAAGAGGTTGGTGTGGGTCCACTCTCATGGAACCACACACTTGAAGCCTACGCTCAGCGCTACGCCAACGAGAGGATCCCGGACTGCAACCTGGAACACTCGATGGGGCCTTACGGCGAGAACATCGCCGAAGGCTACGGCGACATGAAGGGGTCCGACGCCGTGAAGTTTTGGCTGACGGAGAAGCCAAACTATGACTACCACTCAAACTCATGCGTTAACGATGAGTGCCTGCATTACACTCAGATAGTGTGGCGTGATTCGGTTCATGTTGGGTGCGCAAGAGCTAAGTGTAACAACCATTGGGAGTTCGTTATCTACAGCTATGACCCACCCGGCAACATTGAAGGCCAACGTCCCTATTGA 477 0.4948 MNMNVILLALIFFFFMWTMCFAQNTPEDFLSVHNEAREEVGVGPLSWNHTLEAYAQRYANERIPDCNLEHSMGPYGENIAEGYGDMKGSDAVKFWLTEKPNYDYHSNSCVNDECLHYTQIVWRDSVHVGCARAKCNNHWEFVIYSYDPPGNIEGQRPY* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0013 158 CDD CAP_PR-1 26 158 - -
Amo10g0013 158 PRINTS Allergen V5/Tpx-1 family signature 45 63 IPR001283 -
Amo10g0013 158 PRINTS Allergen V5/Tpx-1 family signature 91 104 IPR001283 -
Amo10g0013 158 PRINTS Allergen V5/Tpx-1 family signature 114 130 IPR001283 -
Amo10g0013 158 PRINTS Allergen V5/Tpx-1 family signature 141 154 IPR001283 -
Amo10g0013 158 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 3 158 IPR001283 -
Amo10g0013 158 SUPERFAMILY PR-1-like 22 158 IPR035940 -
Amo10g0013 158 SMART SCP_3 24 154 IPR014044 -
Amo10g0013 158 Gene3D CAP 24 158 IPR035940 -
Amo10g0013 158 PANTHER - 3 158 - -
Amo10g0013 158 Pfam Cysteine-rich secretory protein family 30 142 IPR014044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0013 Amo-Chr10 210560 211157 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0013 K13449 - gmx:100527778 272.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0715 20 10444098 10445022 Amo10g0013 10 210560 211157 hybridization