Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g2843 ATGGTATCCTTAAGCTCTCACTTCCGTTCCACCAACTACTACTTGAATAGGAATAATAATTCTCATCACAATCACAATTACAGAATCAAGCATTGTGTTTCATGCTCTGTCCAGCCTACACAAACCAACATTAAGGTAGTGATAAATGGAGCATCCAAGGAGATAGGAAGAGCAGCAGTGGAAGCTGTGACTAAAGCCAGGGGAATGGAACTCGCTGGTGCTGTAGATATTTGTCATGTTGGGGAAGATATTGGACAGGTATGTGGCATGGAAGAGCCCCTTGAAATACCCATAATAAATGATCTCACTATGGTTTTGGGTTCTATATCTCAGTCCAAGGGAGCAGGAGTTGTAGTTGATTTCACTGATCCTTCCTCCGTATATGACAATGTAAAACAGGTAACAGCATTTGGCATGAGAAGCGTAGTCCACGTTCCGCGAATGCAATTAGATACGGTTGCAGCATTATCTGCATTCTGTGACAAGGCCACCATGGGTGTGTTGGTTGCACCAACCCTTTCCATAGGATCAATATTGCTACAACAAGCTGCAATTTCAGCTTCTTTCCATTACAGAAACGTTGAGATTGTGGAATCCAAGGCTAATGCAAATGATCTTCCATCAGTAGATGCAAACCAAATAGCAAAGAATCTGTCAAACCTGGGTCAGATCTATAACAGAGAAGATGCTTCAACGGATGTGTTGGCAAGGGGTCAAGTCCTTGGAGATGGAATTCGTGTGCATAGCTTGGTACTTCCAGGACTTCCCTCAAGTACAACAGTTCACTTCTCTGCTCCAGGAGAGATATATTCTATCAAGCATGATATTACAAATGTGCAATGCCTCATGCCAGGCTTGCTGTTAGCCATTAGAAAAGTTGTGCGCCTCAAGAATTTGGTGTATGGCTTGGAGAAGTTTTTGTAA 924 0.4275 MVSLSSHFRSTNYYLNRNNNSHHNHNYRIKHCVSCSVQPTQTNIKVVINGASKEIGRAAVEAVTKARGMELAGAVDICHVGEDIGQVCGMEEPLEIPIINDLTMVLGSISQSKGAGVVVDFTDPSSVYDNVKQVTAFGMRSVVHVPRMQLDTVAALSAFCDKATMGVLVAPTLSIGSILLQQAAISASFHYRNVEIVESKANANDLPSVDANQIAKNLSNLGQIYNREDASTDVLARGQVLGDGIRVHSLVLPGLPSSTTVHFSAPGEIYSIKHDITNVQCLMPGLLLAIRKVVRLKNLVYGLEKFL* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g2843 307 PIRSF DHPR 42 307 IPR023940 GO:0008839|GO:0009089
Amo09g2843 307 Pfam Dihydrodipicolinate reductase, N-terminus 44 171 IPR000846 GO:0008839|GO:0009089
Amo09g2843 307 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 43 198 IPR036291 -
Amo09g2843 307 Pfam Dihydrodipicolinate reductase, C-terminus 179 307 IPR022663 GO:0008839|GO:0009089
Amo09g2843 307 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 174 278 - -
Amo09g2843 307 TIGRFAM dapB: 4-hydroxy-tetrahydrodipicolinate reductase 44 307 IPR023940 GO:0008839|GO:0009089
Amo09g2843 307 Gene3D - 43 201 - -
Amo09g2843 307 PANTHER DIHYDRODIPICOLINATE REDUCTASE 25 307 IPR023940 GO:0008839|GO:0009089
Amo09g2843 307 PANTHER DIHYDRODIPICOLINATE REDUCTASE-LIKE PROTEIN CRR1, CHLOROPLASTIC 25 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g2843 Amo-Chr9 107616979 107618691 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g2843 K16908 - gmx:100782083 496.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4464 19 161594167 161595713 Amo09g2843 09 107616979 107618691 hybridization