Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g2820 ATGTCAATTGTCTGTGGCATACCTCTTGTTGAGTGTGTTTACTGTTTGGCTTGTGCCCGTTGGGCTTGGAAACGATGTCTTCATACTGCAGGCCATGACAGCGAGACTTGGGGCCTTGCCACAGCAGAAGAATTTGAGCCTGTCCCTCGCCTTTGTCGCTATATTTTGGCCGTGTATGAAGATGATCTTCGGAACCCTCTTTGGGCACCTCCTGGTGGCTATGGAATCAACCCTGACTGGTTGGTACTCAGAAAGACATATGAAGATACACAAGGGCGCGCACCGCCCTATATGCTGTATCTTGATCACGATCATGCTGATATAGTACTAGCCTTTAGGGGTCTGAATTTGGCAAAGGAGAGTGACTATGCAGTTCTGTTGGATAATAGATTGGGGAAGAGGAAATTCGATGGGGGATATGTTCACAATGGGCTGCTGAAGGCGGCCGGATGGGTTTTGGATGCTGAATGTGAAGTTTTAAGGGAATTGGTGGAAAAGCATCCAAATTACACTCTGACTTTTGCTGGACACTCCCTTGGATCAGGAGTAGCAGCAATGTTGAGCATGGTGGTGGTGCAGAATCGGGATAGACTTGGAAATATCGAGAGGAAGAGGGTCAGGTGCTATGCTATTGCACCTGCTAGATGTATGTCTCTAAACTTGGCAGTAAGATATGCAGATGTCATCAACTCTGTTGTACTTCAGGATGACTTCTTACCAAGGACAGCCACTCCATTGGAAGATATATTCAAGTCTCTTTTCTGTTTACCATGCATATTGTGCTTGAGGTGCATGAGAGATACATGTATACCAGAGGAAACGATGTTGAAAGATCCAAGGAGACTATATGCACCTGGTCGCCTTTACCACATTGTCGAGAGAAAGCCTTTTAGACTGGGAAGGTTTCCCCCAGTTGTGAGGACAGCAGTGCCTGTAGATGGAAGGTTTGAGCATATAGTCCTTTCTTGTAATGCTACATCAGATCATGCCATCATTTGGATAGAGAAAGAAGCACAAAGAGCTCTTGATTTGATGCGGGAAAAAGATAACACGATGCAAATACCTGCAAAGCAAATGATGGAGCGGCAAGAAACTTTAACTAGACACAGTCAAGAATACAAAGCAGCATTACAAAGAGCTAAGACATTAGATGTTCCTCATGCTTCTACACCACCATCACAATATGGTACTTTTGAAGAGGAGGGAGAGGAGAGTTCAAGAAGGTCACAGGGTGAGTCTTCTTTTGGCTCGACTAATAGGAGTACAGTGGAGGAAAGCTGGGAAGAATTAATTGAGCGTCTTTTCGATAAGGATGAGCATGGCCACATTGTACTCAAGAAACAATGA 1347 0.4491 MSIVCGIPLVECVYCLACARWAWKRCLHTAGHDSETWGLATAEEFEPVPRLCRYILAVYEDDLRNPLWAPPGGYGINPDWLVLRKTYEDTQGRAPPYMLYLDHDHADIVLAFRGLNLAKESDYAVLLDNRLGKRKFDGGYVHNGLLKAAGWVLDAECEVLRELVEKHPNYTLTFAGHSLGSGVAAMLSMVVVQNRDRLGNIERKRVRCYAIAPARCMSLNLAVRYADVINSVVLQDDFLPRTATPLEDIFKSLFCLPCILCLRCMRDTCIPEETMLKDPRRLYAPGRLYHIVERKPFRLGRFPPVVRTAVPVDGRFEHIVLSCNATSDHAIIWIEKEAQRALDLMREKDNTMQIPAKQMMERQETLTRHSQEYKAALQRAKTLDVPHASTPPSQYGTFEEEGEESSRRSQGESSFGSTNRSTVEESWEELIERLFDKDEHGHIVLKKQ* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g2820 448 Pfam Lipase (class 3) 109 243 IPR002921 GO:0006629
Amo09g2820 448 Gene3D alpha/beta hydrolase 38 252 IPR029058 -
Amo09g2820 448 MobiDBLite consensus disorder prediction 378 426 - -
Amo09g2820 448 CDD Lipase_3 44 241 - -
Amo09g2820 448 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 447 - -
Amo09g2820 448 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 447 - -
Amo09g2820 448 Pfam Lipase 3 N-terminal region 9 74 IPR005592 GO:0016042
Amo09g2820 448 MobiDBLite consensus disorder prediction 409 424 - -
Amo09g2820 448 SUPERFAMILY alpha/beta-Hydrolases 43 271 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g2820 Amo-Chr9 107235416 107239254 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g2820 1 448 Miscellaneous Gene Families AT3G49050 71.008 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g2820 - - mtr:MTR_1g100950 844.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4430 19 161346192 161350011 Amo09g2820 09 107235416 107239254 hybridization