Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0580 ATGGGGGTTTCCTTCAAAGTTTCAAAGACTGGCACTAGGTTTCGCTCCAAGCCCCTTCCCGCTCATCCCGAACCTTCCAGCGATGGCACCTCCCAGAATTCAATGTCAATTTCCCGCGAGCCACAGAGTGATCTCTCCGTGGCTGGCAAAAACTGGGGTCAGATGTCCACTTTGTCCATTCCATCTGAACCTCTTTCATTAGCAGATGCGGAAGCTTCTTTCACATTGAACCTGTTCCCAGATGGTTATTCTATTGGAAAACCCTTCGAGAATGAGATAGCAAACCATGCTAAGTATCAAGATTTCCCCAAGTTGTTACATCCATATGATAGGTCATCTGAAAGCCTTTTCTTGGCTATAGAGTCAGGCCACTTACCTGCAGACATTCTGGATGATATACCTGTCAAATATGTTGATGGAGCACTTATATGTGAGGTGCGTGATTTTCGAAGATGTGCTTCAGAAAACGGGGCTGGTGTTGTGTCCACTGACATGTCTCCTGTTGTTAATAAAGTATGCCTCAAGATGTCATTAGAGAATATTGTGAAGGACATCCCATCTATCACTGATAAGTCTTGGACATATGGTGATCTAATGGAAGTTGAATCAAAGATACTGAAAGCTGTACAACCAAAACTTCATCTAGATCCTACTCCAAAGCTAGATCGGCTGTGTGAAAGTAGAGCTCCCACAAAGCTTAATTTGAATCTGGGCACTTTGCGGAGAAAACGATTAAGGCATATTCCAGAGTTTGCTGTTACTTCTAATAATGAAATCCATGGTAGGAAAGTATGCACGGAAATAATGCCAGAAAGCTCAAATAGCAGGTTGGGTGATTCAGGTATGGTTGCATCTAATGCCATTTTGCAGCAGACCCTTGAAAATCCAGCAACGCAAAATTTTAATCCACAAATTGCTATGGCCTTGAGACCCAAGACTTTCATACCAGATTCCTCTGTCCCAGGATTTTCTATGTTGTCTAATCAATCAAGGTATCAAATGGCATCTGCTGCTATTAATCAATCTGGGGCATCTCCTGCTTCACAGGATCCCATGATTTCATATGCTGATAATACAAACGCAAATGCCTCCATTCATGCAAAACGGGATAGTCAACATGGACAAACATCACCTTTATCCAATCTTGCAAAAAGAATGAGGCATTCTTCCGCAGGTGTTGACACAATGCAACAGCAGCCAGTTAGCACACATTCTGAAGCTCTTCAAGGATCGGATATGAACTGGCAGAATCCATTATTGCCACAACAAGCAATGACCAGAGGTATTCAGTATGTGAGCAGTGGTAATCAGAAATTTTCCCAGAAGGTATTTGAAGGGGTGCTGAATCAAGATCAGGGGGCTGTTCATTTGGCTTCTGGTCAGCATGGTATCAGATTAGTTGCAAAGGAAGAACAGTTTGAAATGGATAAATTAGATGGCACAGAAATGAACCGCAGTATGCAAATGGAGACAAGCAATCTAGATTCCCAACAGTTGCTGCTTCAGCAACGGTTGCCACAGGCATTCATGAGACCGAATTTCCCTCAGACAACCTGGAATGCTATGGGTCAGCATATGGAGAAAGAAGCGAAAAAAGAAGACCAGGTTGTTCAGAAAAGGAAGTCAATACAGAGTCCTCGTTTATCTAGTGGGGCATTACCTCATTCGCCATTATCTTCAAAATCAGGAGAACTTTCGAATGGTTCAGTTGGACCAAGTTTTGGACAATCTGCAATGACAGCTGTAGCTGGTGCATCACAAAAGGAGAAGATATCAATGGCTTCAGTTCCTGCTGCTGTTGGAACACCACCTTTGACTTCTAATGCTAATGATTCTGCACAAAGACAACACCAGGCACAACTGGCTGCCAAACGGAGATCTAATTCCCTTCCCAAGACCCCAGCAATGAATGGAGTTGGTTCTCCGGCTAGTGTTGGTAATGGGGTTCCATTGAATGCAAATAGTCCTGCAGTTGGTACCCCTGCTATGGTTGATCAAGGTCTTCAAAATATGCTTGAAAGGTTCTCAAAAATTGAACTGGTCACAACGAGGCTTCAACTGAACTTAAAGAAGAACAAGTCTGATGATTATCCCATAAGAAAGCAGAATACATATTCACCTCAGCATTTGTCAGCTTTTCTTGCCAATCCAAACAATAATGAAGGATTGATAGAGGAAACAAGTTCTTTGTCAAAGTCGCTTATAGGTGGAAGTATGAATGTCTGCAAAATGAGAGCTTTAAGTTTCTGCTTGCCGGAGCGTGTACTCCAAGGAAATGTTGTCTCTTTAGTTCCCAGGTTACGAATTAGGATGATAATGGCTGAGAAGCCATCTGATGGTACCGTGGCTATGCATTATGGGGACATTGATGAGGGGGATTTCCTAGCCTCAGAGGAACATCTCCCCACATTACCCAACACTCATTGTGCGGATTTGCTTGCAAAACAGTTCTGCTCCCAGATGGCACGTGAAGGATATATGAAGGAAGATGACCGAATCCAAATCATGCCAAACCGGGTAAACTTTCAAGCAGGAAGTCAATCTAGTGTACCTCCGAATAACTCTGTAGTTGAAATGCAGCAATATGGAGACCCAACTATTGGTCAATCATCCAATGAATTTGCAAAACCGGCTAGTAACAGTAATGCCTCTTTAAACTTACCTCAGAATCTTGTGGCAAACCCAAGGATGCTACCACCTGGAAACCCTCAGGCCTTACAGATGTCACAAGGACTTCTCTCTGGTGTTTCAATGGCACCAAGACCACAGCAGCTGGAGGCACAAGCACTACAGCAGCAGCAACAGCAGCTACAACAGCACACCCTCATTCAACAGCAGAATCCTCAATTCCAGAGGTCTATGATTCTAGGAACAAATCAATTTCCACACTTAAATGCAATTGGCCAGAACTCCAACATATCATTGGGTAATCACATGCTCAGCAAGTCTTCACCTCTACAAATTCAGATGTTACAGCAGCAACAGCAACAGAACCAACAGCCGCAAATGCAAAGAAAAATGGTGGGATTGGGAACAACTGTGGGTTTGGGTAACATGAGAAATAACATAGTTGGGCTTGGACCCATGGGTAATCCTATGGGAATGGGAGTGGGGCGAGGTATAGGAGGAACTGGAATCTCTGCACCAATGACATCCATTTCTAGCATGGGAAATATGGGTCAGAGCCCAATGAATCTAAATCCAGCCTCAAATATTTCGAATGCAATAAGCCAACGGCTAAGGTCTGGAAGTATTACTCCGTCACAGGCTGAAATGTTGGCATCGAAGCTTCGAATGACACATAATGGAAGCATGTTAGGGTCTCCTCAGTCTAGCATAGCTGGCATGTCAGGCTCCAGACAAATTCACCCTGGTTCTGCTGGTCTTATGTTGGGTCAATCTCTGAGTAGGAGTATGAATACACTTCCACGAGCTGTCGGACCTATGGGTCCACCTAAGCTGATGGCAGCAGGGATGAATCTTTATATGAATCAGCAGCAGCAGCAACTTCAACCCCAACAGCAGCAGCAACAGCAACAGCAGTTGCAAGCACAACAGCAAACGCAGCAACTACAACAGCAACTTCAGCAACAATTACAGCAGCAACAAGAAACAAGTTCGCAATTGCAGGCAGTTGTTTCACCTCCACAGGTGAGCTCACCATCTACGATGGGAGTTCCATCACTGAATCAACAAACTCAGCAGCAAGCAAGCCCACAGCAAATGAGTCAACGAACTCCAATGAGCCCACAGCAGATGAGCTCAGGGGCAATTCATGCTTTGAGTGCTGGTAATCCAGAAGCTTGTCCAGCTAGTCCACAGTTGAGCTCACAGACGCTAGGGTCTGTCAGCAGTATAGCAAACTCACCTATGGACATGCAAGGTGTTAACAAGAGCAATTCTGTCCACAGTTGA 3915 0.4432 MGVSFKVSKTGTRFRSKPLPAHPEPSSDGTSQNSMSISREPQSDLSVAGKNWGQMSTLSIPSEPLSLADAEASFTLNLFPDGYSIGKPFENEIANHAKYQDFPKLLHPYDRSSESLFLAIESGHLPADILDDIPVKYVDGALICEVRDFRRCASENGAGVVSTDMSPVVNKVCLKMSLENIVKDIPSITDKSWTYGDLMEVESKILKAVQPKLHLDPTPKLDRLCESRAPTKLNLNLGTLRRKRLRHIPEFAVTSNNEIHGRKVCTEIMPESSNSRLGDSGMVASNAILQQTLENPATQNFNPQIAMALRPKTFIPDSSVPGFSMLSNQSRYQMASAAINQSGASPASQDPMISYADNTNANASIHAKRDSQHGQTSPLSNLAKRMRHSSAGVDTMQQQPVSTHSEALQGSDMNWQNPLLPQQAMTRGIQYVSSGNQKFSQKVFEGVLNQDQGAVHLASGQHGIRLVAKEEQFEMDKLDGTEMNRSMQMETSNLDSQQLLLQQRLPQAFMRPNFPQTTWNAMGQHMEKEAKKEDQVVQKRKSIQSPRLSSGALPHSPLSSKSGELSNGSVGPSFGQSAMTAVAGASQKEKISMASVPAAVGTPPLTSNANDSAQRQHQAQLAAKRRSNSLPKTPAMNGVGSPASVGNGVPLNANSPAVGTPAMVDQGLQNMLERFSKIELVTTRLQLNLKKNKSDDYPIRKQNTYSPQHLSAFLANPNNNEGLIEETSSLSKSLIGGSMNVCKMRALSFCLPERVLQGNVVSLVPRLRIRMIMAEKPSDGTVAMHYGDIDEGDFLASEEHLPTLPNTHCADLLAKQFCSQMAREGYMKEDDRIQIMPNRVNFQAGSQSSVPPNNSVVEMQQYGDPTIGQSSNEFAKPASNSNASLNLPQNLVANPRMLPPGNPQALQMSQGLLSGVSMAPRPQQLEAQALQQQQQQLQQHTLIQQQNPQFQRSMILGTNQFPHLNAIGQNSNISLGNHMLSKSSPLQIQMLQQQQQQNQQPQMQRKMVGLGTTVGLGNMRNNIVGLGPMGNPMGMGVGRGIGGTGISAPMTSISSMGNMGQSPMNLNPASNISNAISQRLRSGSITPSQAEMLASKLRMTHNGSMLGSPQSSIAGMSGSRQIHPGSAGLMLGQSLSRSMNTLPRAVGPMGPPKLMAAGMNLYMNQQQQQLQPQQQQQQQQQLQAQQQTQQLQQQLQQQLQQQQETSSQLQAVVSPPQVSSPSTMGVPSLNQQTQQQASPQQMSQRTPMSPQQMSSGAIHALSAGNPEACPASPQLSSQTLGSVSSIANSPMDMQGVNKSNSVHS* 1305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0580 1304 PANTHER TRANSCRIPTION FACTOR SPT20 HOMOLOG 1 1144 - -
Amo09g0580 1304 MobiDBLite consensus disorder prediction 386 407 - -
Amo09g0580 1304 MobiDBLite consensus disorder prediction 1269 1304 - -
Amo09g0580 1304 Pfam PHL domain 684 837 IPR046467 -
Amo09g0580 1304 MobiDBLite consensus disorder prediction 1208 1304 - -
Amo09g0580 1304 MobiDBLite consensus disorder prediction 541 572 - -
Amo09g0580 1304 Coils Coil 1174 1212 - -
Amo09g0580 1304 MobiDBLite consensus disorder prediction 1 46 - -
Amo09g0580 1304 MobiDBLite consensus disorder prediction 527 572 - -
Amo09g0580 1304 MobiDBLite consensus disorder prediction 602 648 - -
Amo09g0580 1304 MobiDBLite consensus disorder prediction 1208 1259 - -
Amo09g0580 1304 MobiDBLite consensus disorder prediction 391 407 - -
Amo09g0580 1304 MobiDBLite consensus disorder prediction 25 46 - -
Amo09g0580 1304 PANTHER TRANSCRIPTION FACTOR SPT20 HOMOLOG 1 1144 IPR021950 GO:0000124|GO:0003712
Amo09g0580 1304 MobiDBLite consensus disorder prediction 602 635 - -
Amo09g0580 1304 Pfam Spt20 family 70 223 IPR046468 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0580 Amo-Chr9 8136152 8146669 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0580 - - gmx:100810803 1579.69