Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0467 ATGGGTCTAGCTCAAAGCGCCGAAGCTGCGGCACACGTCACCCAAACCCAAATCCAAACCCAAACCTCAACCCAGACCTCAACCTCGAACAATTCTAATTCCACTTCCCTCGATTCCGTTCTTGCAGAAGCTGCGGCATATGGAAACAACGATGACACTGAAGAGTCTATTGAGGCGAAGGCTCAGAGAGCTCTAGAATGTCCTTGCATTGCTGACTTGCGAACTGGTCCCTGCGGCTTCCAGTTCTCGGAGGCGTTTCTCTGTTTTCTAAAGAGCACTGCTGAAGAAAAGGGATCAGACTGCGTAAGTCCATTTGTCGCCCTGCAGAGCTGCATCAAGGCCAACCCAAATGCATTTTCTAAAGATGTTCTAGGTGAAGATGAAAGTGAGAAGCCTGAATCAACGCAGGAATATAAGATACTTCCTCCACAATGGTCTAGGGAGCCACAAAGTCCAAAATCCAGGCTTTAA 471 0.4841 MGLAQSAEAAAHVTQTQIQTQTSTQTSTSNNSNSTSLDSVLAEAAAYGNNDDTEESIEAKAQRALECPCIADLRTGPCGFQFSEAFLCFLKSTAEEKGSDCVSPFVALQSCIKANPNAFSKDVLGEDESEKPESTQEYKILPPQWSREPQSPKSRL* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0467 156 MobiDBLite consensus disorder prediction 1 35 - -
Amo09g0467 156 Pfam CHCH domain 78 113 IPR010625 -
Amo09g0467 156 Gene3D - 47 123 - -
Amo09g0467 156 PANTHER AU015836 PROTEIN-RELATED 8 151 - -
Amo09g0467 156 MobiDBLite consensus disorder prediction 9 35 - -
Amo09g0467 156 PANTHER COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 4 8 151 IPR039289 GO:0015035|GO:0045041
Amo09g0467 156 MobiDBLite consensus disorder prediction 122 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0467 Amo-Chr9 5838882 5840735 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0467 K17782 - gmx:100305988 195.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0975 19 16340793 16342682 Amo09g0467 09 5838882 5840735 hybridization