Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0274 ATGTACGGCGGACTCTCTTCCAAGCTGGGCCGCTCCGCCGCCCACAACAAGCGCCCCCACTCATCCTTCCCTCCACCCCCGCGTCCCTCTGGCCCTGGTGGTGGCCCCGGTAGACTCTCCCTCGGAGGCGGCTCCGCCCGCAAACCCGCCGCCGCAACCGCCTCCAAGACTCCGCCGGCGGTGGAGGAGACCTTTAATCTGGTGGCGGGAAGCGACGCGCTGGCGTTCTCGATGATCATAAGACTTGCGCCTGACCTCGTCGACGAGATCAGGCGCGTAGAGGCACAAGGTGGTAGGGCGCGTATGAAATTCGACCCCAATCCTCACAATCCCAACGGGAATATTATTGATGTTGGTGGAAAGGAATTCAGGTTTACATGGTCAAGGGAATTTGGTGACCTTTGTGATATTTATGAGGAGCGGCAGAGTGGTGAAGATGGAAATGGTTTGTTTGTTGAATCTGGCTCTGCATGGCGCAAGCTGAACGTGCAGCGAATCCTGGATGAGTCGACTAAAAATCATCTCAAAATGCGGTCAGTCGAAGCCGACAAGAAGTCAAAGCAACGGAAAGCCATTGTCTTAGAGCCTGGAAACCCATCTTTGAAGTGCCAGATTAAGCAATTAGCTGCTGTGGAGGCTACACCATGGAAGAACTACAATAAAAAGAAAGAGGCTGCTCTTAAGAAAAGGAAAGTGGAGACTCTTCAAGTCGGAGGCCCCCCAAAAACTACCCATAACCCTAAATCTGGATTTATGTCAACAACTACTTCTAAGAGCAAAATTCCTTCCCCTCTTCCATCTCCACCTGATCCATTTGCTGCTGCTTCCTCTCCACTCGGGGCAGTAAATACTTCTAAGGTTAATGATGATGCTGTACCATCACAAATGATGGGTAAGCAAGATACAAATGCAATTCCTGAGAAAGAAATCCCCACCAAGGCAAACAATGCTATGAGGAATTCATTAGGAGGCAAGGGAAATAATGGATCTAAACCAACAGATTTGCAGGGCATGTTGGTTTCTCTTCTCATGGATAAACCTAAAGGAATGAGTTTGAAGGCGTTGGAGAAAGCTGTTGGCGACATGCTTCCGAATTCTGTAAAGAAAATTGAGCCCATTATAAAAAAAATTGCAAAATACCAGTTCCCAGGGAAGTATATTTTGAAGCCGGGAGTGGATTTGGAAAGCATAAAAAAGCCTCAGAATGAATGCGGAAGCTCCCCTGATGATAACAATCCCCAAATGCATGGACGTGAAGAATTTCATGATTCAACGTCAGCTCCACAGGGTGGCTTTGAAGAGAAAGTCTCAAATGACGATTTTGAGGAGCATTTGCAAGGAAAATCCAAAGTGGAAGAAGAATTAAACACATTGGAAAAGGTTGACATTCTACATACTTCACCTGATATTGGTGATGAAAAAAGAGGTGCTGATAATAGTGAAGGGCAGGCAGGCAGCTCTAGTGAGAGTGGAACTGACAGTGACAGTGAAAGTGACAGCAGTGACAGCGGAAGTGAGAGTGGAAGCCGTAGTAGGAGCAGAAGTAGAAGTCCTGCTGGAACAGGGAGTGGGAGTAGTAGTGACAGTGATACTGATGCATCTTCCAGCAGTAAGGACATCCAGGACGGTTCTGATGAGGATGTAGATATTATGACTAGTGATGATGAAAAAGAGTCAAGGCCCAAACCAGAAGCCTCTGATCCAAGAATATCGTTACCCGGTCCAGTAAAATCTCCTGATGGAAGATCTATGCAGAATGAGTTTCATGAGAAGCAGGATGGTAATGAATCTGATGCAGTTGAGATTGAAAAAGACTTACCTGAAGAAGAAGAAGCTGAAATTGCTCCAACTACTGGTGCCATCTCTAATGCAAGTGGCAAATTTGCAGATGATACAAAACCTTTTTCACCTGATTTGCAACAGCTCCAAGAGCGCCAAAATTATATTGGGAGTTTGTTTGATGAAAGGGAAAGTGATGTTAAGGATAGCTATAGGCATGAACAGTCTGACAGCTCTGATAGGCTATCGATGGGTAAGAAGAGGCCTTCTAATGTGAAGAACATTGATGAGAAATCTGAACGGACCAAGAGGTTGAAAGCAGGAAACTTGGCTCAAGGATCATTTTCTCCTGACATGGATGTGCAAATGTTGGAGAGTTCTCACAATTTGTCTCCTCCTGAATTTGCTGAAGGCAATTCTAAGGGCCCCACAACACAATTAATTAATAGAGCTGATAGACAAGGAAACACAACTGGTTTACAAAAAGGATTCAATCAAGCGTTTCCTGGAAAACCTACTTCAGATTTACCCCATACAGTTCAAAGGACCTTTGATCACACTCCTGTAGTAAACCCAACCAATGCATTGGAAAAACCAGAAAGCGTAAGGCACAACAAAAAACACCCAGGAAGGGACTTTCATGTGCCTGAAGCTTCTTCTATGCAAAAAGAAAAATCTCATAGAGATGCCCAAAATGAAGTCATTCACGCCACTGAGAAAAAAGTCCCCAGGAATTCCAGAGATGGTAGTGATGGAAGTAAACAATTACCATCCATGGATTCACATTACCAAAAACAAGGCAATATGGTTGGTAAGTATAAGGAAGGACGAAAAAATGCACAGCAACACTTAATAACATCACCCAATGAAAACAACAGAACTTGTCTTGATAAATCCCCCGTAATTAATGGAAGAGGTACACTTCTTCAGAGAGAGCATTCAGATTTGGAATTGGGTGAACTCCGTGAGTCCACTCCTGATGAAGCCCCTGCTGCAAGGCAATTTGATCGAAAGGGTTCGTTTAAACATGTGGATAACAAAGGTAGCATTTCAGAGGTCAGGAATGCAGATATTTCTAAAGCAAGGTCTTCATTAAAAGCATCTTTAGACTCAGGGAAGCAGTCCCCAGCCCTTGTTAGTTCTGGTTTACCCACCAATCTGGAAAGCACCAATAAAAAGAACTCGGACAATCATTTTGAAGATACAACAAGGTCTCATTCTAGAGTTATTCCATCTCAATCACAACATTTGAAATCTGACCATGTGGAAGTTGGGTCTCAAAACAAATTCGCAGAGAGGAGCAGTAAATTCAGAATTAATGACTTTGGGGCGAGCCAAGATATTGACTTGGAAGGTCGCAGTGAAAGCAATAGAAGAGCACCTGTTAATGCATCTAAACAGCAAGACAATAAACGTGGAACAGTTTTGCACACTGTCAAAGAAAATAAAAGGCGAACACCTAATTTGTCGGAAGATATGGCTGATGGAGGAAAAGATTTACTGTTGGTAGATATAAATAACAGCGATCAAAAGAAGAGAGAATCATCTTCAGATGAAAATAGTTGCTCTTATTCGAAGTATGAAAAGGATGAGCCTGAACTGAAGGGACCGATAAGAAATTTCACCCAGTATAAAGAATATGTGCAGGAATATAGGGATAAATATGATAGTTACTGCTCCTTGAACAAGATCCTGGAGAGTTACAGGAATGAGTTTATGAAACTGGGCAAGGATTTAGAAAATGCTAAAGGCAGGGATATGGACAGATATTATGAAATCTTGGGGCAGATAAAAGAATCCTACCGACGTTGTGGAACGAGACACCAGAGATTGAAGAAAATATTCCTTGTGCTCCACGAGGAACTGGAGCATATTAAGCGAATGATCAGAGAATTTGCGGACTCATACAATAAAGAGTAA 3699 0.4358 MYGGLSSKLGRSAAHNKRPHSSFPPPPRPSGPGGGPGRLSLGGGSARKPAAATASKTPPAVEETFNLVAGSDALAFSMIIRLAPDLVDEIRRVEAQGGRARMKFDPNPHNPNGNIIDVGGKEFRFTWSREFGDLCDIYEERQSGEDGNGLFVESGSAWRKLNVQRILDESTKNHLKMRSVEADKKSKQRKAIVLEPGNPSLKCQIKQLAAVEATPWKNYNKKKEAALKKRKVETLQVGGPPKTTHNPKSGFMSTTTSKSKIPSPLPSPPDPFAAASSPLGAVNTSKVNDDAVPSQMMGKQDTNAIPEKEIPTKANNAMRNSLGGKGNNGSKPTDLQGMLVSLLMDKPKGMSLKALEKAVGDMLPNSVKKIEPIIKKIAKYQFPGKYILKPGVDLESIKKPQNECGSSPDDNNPQMHGREEFHDSTSAPQGGFEEKVSNDDFEEHLQGKSKVEEELNTLEKVDILHTSPDIGDEKRGADNSEGQAGSSSESGTDSDSESDSSDSGSESGSRSRSRSRSPAGTGSGSSSDSDTDASSSSKDIQDGSDEDVDIMTSDDEKESRPKPEASDPRISLPGPVKSPDGRSMQNEFHEKQDGNESDAVEIEKDLPEEEEAEIAPTTGAISNASGKFADDTKPFSPDLQQLQERQNYIGSLFDERESDVKDSYRHEQSDSSDRLSMGKKRPSNVKNIDEKSERTKRLKAGNLAQGSFSPDMDVQMLESSHNLSPPEFAEGNSKGPTTQLINRADRQGNTTGLQKGFNQAFPGKPTSDLPHTVQRTFDHTPVVNPTNALEKPESVRHNKKHPGRDFHVPEASSMQKEKSHRDAQNEVIHATEKKVPRNSRDGSDGSKQLPSMDSHYQKQGNMVGKYKEGRKNAQQHLITSPNENNRTCLDKSPVINGRGTLLQREHSDLELGELRESTPDEAPAARQFDRKGSFKHVDNKGSISEVRNADISKARSSLKASLDSGKQSPALVSSGLPTNLESTNKKNSDNHFEDTTRSHSRVIPSQSQHLKSDHVEVGSQNKFAERSSKFRINDFGASQDIDLEGRSESNRRAPVNASKQQDNKRGTVLHTVKENKRRTPNLSEDMADGGKDLLLVDINNSDQKKRESSSDENSCSYSKYEKDEPELKGPIRNFTQYKEYVQEYRDKYDSYCSLNKILESYRNEFMKLGKDLENAKGRDMDRYYEILGQIKESYRRCGTRHQRLKKIFLVLHEELEHIKRMIREFADSYNKE* 1233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0274 1232 MobiDBLite consensus disorder prediction 769 783 - -
Amo09g0274 1232 Gene3D - 1133 1229 - -
Amo09g0274 1232 Coils Coil 1158 1178 - -
Amo09g0274 1232 MobiDBLite consensus disorder prediction 1051 1065 - -
Amo09g0274 1232 MobiDBLite consensus disorder prediction 583 601 - -
Amo09g0274 1232 MobiDBLite consensus disorder prediction 954 985 - -
Amo09g0274 1232 MobiDBLite consensus disorder prediction 708 761 - -
Amo09g0274 1232 MobiDBLite consensus disorder prediction 398 942 - -
Amo09g0274 1232 Pfam Occludin homology domain 1129 1226 IPR010844 -
Amo09g0274 1232 MobiDBLite consensus disorder prediction 792 841 - -
Amo09g0274 1232 MobiDBLite consensus disorder prediction 873 891 - -
Amo09g0274 1232 MobiDBLite consensus disorder prediction 842 858 - -
Amo09g0274 1232 MobiDBLite consensus disorder prediction 480 494 - -
Amo09g0274 1232 SUPERFAMILY occludin/ELL-like 1130 1227 - -
Amo09g0274 1232 MobiDBLite consensus disorder prediction 1066 1085 - -
Amo09g0274 1232 MobiDBLite consensus disorder prediction 999 1014 - -
Amo09g0274 1232 MobiDBLite consensus disorder prediction 1098 1122 - -
Amo09g0274 1232 MobiDBLite consensus disorder prediction 225 268 - -
Amo09g0274 1232 MobiDBLite consensus disorder prediction 954 1022 - -
Amo09g0274 1232 MobiDBLite consensus disorder prediction 239 261 - -
Amo09g0274 1232 MobiDBLite consensus disorder prediction 435 479 - -
Amo09g0274 1232 ProSiteProfiles Occludin/ELL (OCEL) domain profile. 1122 1230 IPR010844 -
Amo09g0274 1232 MobiDBLite consensus disorder prediction 1041 1122 - -
Amo09g0274 1232 MobiDBLite consensus disorder prediction 1 58 - -
Amo09g0274 1232 MobiDBLite consensus disorder prediction 903 942 - -
Amo09g0274 1232 PANTHER DENTIN SIALOPHOSPHOPROTEIN-LIKE PROTEIN 7 1231 - -
Amo09g0274 1232 MobiDBLite consensus disorder prediction 501 538 - -
Amo09g0274 1232 MobiDBLite consensus disorder prediction 650 698 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0274 Amo-Chr9 3190966 3199032 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0274 - - adu:107464201 2194.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0426 19 5736859 5745088 Amo09g0274 09 3190966 3199032 hybridization