Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0126 ATGCCATCAGCAACTACTACTTCAGATTCTGGGGGACAAAAAATGTTTCGCTGGTTCTTGAAACCAAGATTCTACTCAAAATGCTTGACGTACGTGAAGTTCTTAAGGACGAGGCTAGAGAGTGTACAAAAGAAGAGGAATGCGGTTCATAGGATTATGAAGAGTGACATTGCAGAGCTTCTCAGGAATGGACATTATTATGATGCTTATAAAAGGGTTGAAGGGCTTGTATTGGAGCAAAATATGTTATTTTGTTATGAACTTGTTGCACAGTTCATTGGATGCATATCAGATCATATTCAAGACTTAACTAAGCAGAGTATTTGCCCTGATGAATGCAAAGAAGCTGTTCCATCATTGATATATGCTGCAGCAAGAATTTCTGATCTTCCAGAATTGCGTGACCTCAGAACACTGTTTACAGATAAATTTGGAAATTCTCTTGAACCTTGTACAAGTAAAGAGTTAATTGAGAAGTTGAAGAAAGATCCTCCTTCTAGAGAAATGAAGATTCAGTTATTGCATGAAATAGCACAAGAGTTCTCTATAGAGTGGGATAGCAAAGCTTTGGAGCAAAGGCTTTCTAGACAGCCATCATTGTATGAAGAGAGGCCTAAACCTGAAAAAACAGAGAAGCAAGTTGGTGTGGAAAAAGAGCACAAAAAAGAAACAGACTATAATGCATCATCACAAGAAGGAATCAAAGAATTCAATGATGAACAATGGAGGCAGCAAATCAGCAGTGACGACGACGACGATTCTAGCACCGATATGTCATCGGTCCACGGCCGAAAGCCGAGTTCTAGCTCCCTCGGAAGCATATCCGAGGATGACACAGAAATCATCAGTAACAAGAAACCTTATTGGCTTGTTCCTCCTCCTTACCTCAAACAAAGAACTAACAAAGGCGAAATCAATTCAAATTCAAAGAAGAAAACAAGGACAGATTCGGAACCAAACCATGAGGATCAAGCTCCAAGATCATCATCAAGGAGCAGAAACATGATGAAATCAAGAGCAACAGAGGATAACATTATTGGTTCTGATTCTTCCAAGAACAGAAGATCATATGTAAGAGGAACATCTCTTCCTCCTAGACCAACAAACTCATCATCAGTTGAAGAAACATCAAGAGGGCATGGAAGATCAATTTCAATGGATTCTGAAGTGAAGAGTATTGTGCATCCTAATCTACCTGATTATGATGATTTGGCAGCTCGTCTTAGAGCTCTCAGAGGAACATAA 1245 0.3944 MPSATTTSDSGGQKMFRWFLKPRFYSKCLTYVKFLRTRLESVQKKRNAVHRIMKSDIAELLRNGHYYDAYKRVEGLVLEQNMLFCYELVAQFIGCISDHIQDLTKQSICPDECKEAVPSLIYAAARISDLPELRDLRTLFTDKFGNSLEPCTSKELIEKLKKDPPSREMKIQLLHEIAQEFSIEWDSKALEQRLSRQPSLYEERPKPEKTEKQVGVEKEHKKETDYNASSQEGIKEFNDEQWRQQISSDDDDDSSTDMSSVHGRKPSSSSLGSISEDDTEIISNKKPYWLVPPPYLKQRTNKGEINSNSKKKTRTDSEPNHEDQAPRSSSRSRNMMKSRATEDNIIGSDSSKNRRSYVRGTSLPPRPTNSSSVEETSRGHGRSISMDSEVKSIVHPNLPDYDDLAARLRALRGT* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0126 414 MobiDBLite consensus disorder prediction 196 390 - -
Amo09g0126 414 MobiDBLite consensus disorder prediction 236 259 - -
Amo09g0126 414 MobiDBLite consensus disorder prediction 260 278 - -
Amo09g0126 414 MobiDBLite consensus disorder prediction 304 328 - -
Amo09g0126 414 Pfam Regulator of Vps4 activity in the MVB pathway 31 183 IPR005061 GO:0015031
Amo09g0126 414 PANTHER REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN 22 413 - -
Amo09g0126 414 PANTHER IST1 FAMILY MEMBER 22 413 IPR005061 GO:0015031
Amo09g0126 414 MobiDBLite consensus disorder prediction 196 229 - -
Amo09g0126 414 Gene3D - 20 191 IPR042277 -
Amo09g0126 414 MobiDBLite consensus disorder prediction 329 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0126 Amo-Chr9 1184459 1187626 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0126 - - ahf:112709856 795.038