Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0068 ATGGCGAACCAGGTGACAGTGAGGGACCTCGCGGAAGAAGCCAAGAAGAGGATTGTCATCTTGCTCGTCTCTGTCGTTGGACTCTCCTATCTCATGTCCCTGACAAGCTCCACAGTTTGGGTCAACTTGCCAGTTGCAGCCTCCTTGATCATCTTTCTCAGGTATTTATCATTAGATTTTGAAATGAAGAGAAAAACAGCAGCATACAACAATAAAGCAGGCTCCACCAATGTTCAGTCTTCAAAGAAGCCCATTGAAAGTTCTAAAGTTGTTGCAAAATTTGAGTGGAGAAAAAAGGTGAATTCTCCTGTTGTTGAAGACGCAATTGATCACTTTACCCGGCATCTAGTTTCTGAGTGGGTGACGGACCTGTGGTACTCTCGCATAACACCAGACAAAGAGGCTCCCGAGGAGTTAGTACAACTAATAAATGGTGTTCTTGGGGAAATTTCAGGACGCATGAGAAATATAAATCTAATTGATCTCTTGATAAGGGATCTGATAAATCTCATTTGCACACACTTGGAGCTGTTTCGTGCTGCCAACTCAAAGATTCAAAAAATGCATAAAGGTCCATTGACAATTGAAAGTCGAGATATGGAACTAAAAATTGTATTGGCTTCTGAGAATAAATTGCATCCTGCTCTATTTTCTGCTGAAGCTGAGCATAAGGTTTTGCAGCATCTGATGAATGGCCTCATGTCTGTCACTTTCAAGTCCGAGGATCTGCAGTGTTCTTTCTTTCGATGTACTGTCAGGGAACTCCTTTCATGCACTGTCATGCGGCCTGTCCTAAACTTAGCCAATCCAAGATTTATTAATGAAAGAATTGAAAATGTAGTAATCAATAAGACCAAGATTAATCCGGGGATTGCTGTAGCTCAAGATGCATCTCAGACTAATGCAGATGAATTACAGACTTCGTCTGACCATTTCTCTGACTGTTTAGATCCTTCTGTTAGTGGTGTGGAGCTTGTGCAGTTGAAAAATGCTCCTTCCAAGAATGCAGGGTCATCTGCAAAAAATAAAGCATACGATAATACTAAAGATCCATTGCTTTCAGTTGATGCTCGGTCTTCTCGTTCATGGAGCTCATTGCCTGGAAATGCCCAAATTAATTTGGAACAAGGTATTCAACGCCATCGTTCTGGTGGAGAGTGGGGAGATATCTTAGATGTTATCTCTCGAAGAAAGACCGAAGCCCTTGCTCCAGAACATTTTGAAAACATGTGGACAAAAGGGAAAAATTACAACCAAAAGGATGATGAGAACCAGCCAATTGGCCGTCCACAGCTTCCTGTAGCAGGACAATCACGAAGGGTAGATCATATGAAGACAAAATCTGGAACCCAAGGAAAAGGCACTAATTCAAAGATGATTCCACCTAAAGGAAGCCAAATTAATTCTGGATACAGCAGTCCGTTGACTGGTGAACATACACCCTTTCATGCAGACAAGAATGGATCAGCTTCTTCTACAGTCCCTTCATATAAAGATGATGAGCATGAGCGCATCCATATGCAAGTTGGTGACTCTGGGAGCACTTCTTCTTATACTTCTGAAGATGATGATCCTAACACTGTCACTGGTCTTGATTCCCCTGTAACTAAGGTTTGGGATGGAAAGACTAATAGAAACCAGGCAGTTTCCTATGTTCATCACCCACTTGAAAATTTTGATAATCATGGTACCAAGAAGAGGAATAAAAGCCATTCTCGCTATCCTAAATTACGTAGAACCAGGTCTGGAAGTAAAAGGTCTAGATCAAGTGATCATGACCCAAATACATGGGAGGAAGTTGAGAGGACAAGCTTTTTGTCTGGAGATGGTCAAGATATACTTAGTGTTTCAAAACACACTAATTCTGATGATTCCAGTGATGATGCTGATACTGAAAGTTTGGGTAGAATTTATAGTGGAGCAGCAGCTTCATCTTCTGCATCCTCTATTTCAAAAGCAGAATCTTGTAGTTTGGTTGTTAATCCCCGTAAAAGCTCCTCAGCCATAGGTTCCTTTTTCAAGTTGAGATGTGAGGTCTTAGGTGCAAATATTGTGAAGAGTGGCTCAAAATCATTTGCTGTTTATTGCATATTGGTTACAGATGTAAATAACAACAGTTGGTCAATTAAAAGAAGGTTTCGGCATTTTGAGGAGCTACATCGACGCCTGAAAGAGTTTCCTGAGTATAATCTTCATTTGCCTCCAAAACATTTTCTGTCAACAGGTTTAGATGTACCAGTCATTCTAGAGCGGTGTGAATGGCTGGATAAATATTTGAAGGAACTCGTGCAGCTACCAACAGTTTCTGAATCAATTGAAGTATGGGACTTTCTGAGTGTTGACTCTCAGACATACATATTCACAAATTCATTTTCAATCACAGAAACGTTACCAGTTGGACTCCATGCTAAGCCATCTGAGAAGACTAAAAGCTCTTCCAACTTCGCTGCACCTGCAAGTGACGTTTTTGCCACYCGAAGAGAAAATTATAGTGCTGACAGCAAAGAGGCTATTCTGCAAACAAGAAATAATGCTGCGGTTGATGGATTGAAATCAAAAGCAAATGGTATGCCTCTTTCTCTACCAAAAAGGAATGCCCAGGAACCTATAAAGCCAGTTGACAAGTCTGGAAGCAATGCAGATATTATTCCATCAAAGACTGTTTCTTCTCTCAATAACGTGCAGAAGACGGTGAAAAGAGATGGTTCAGAGGTGTCTAATGTGCAGCATGATACTTCTGATGGTTTTCCAACAGAGTGGGTACCACCAAATTTGAGTGTACCAATATTGGATCTCGTTGATGTTATCTTCCAGCTTCAAGATGGTGGATGGATTAGGCGGAAGGCATTTTGGGTTGCTAAGCAAGTCTTACAACTAGGAATGGGTGATGCCTTTGATGATTGGTTGATAGAGAAAATCCAGCTTCTCCGAAAGGGATCAGTGGTTGCTTCTGGAGTCAGCCGAGTTGAACAGATACTTTGGCCTGATGGAATATTCTTAACCAAGCACCCAAATAGACGACCACCACCATCTCCTGCTAAAACATCTGAGAGTTCACCTCCTGGCCAAAAACCTGCAGAAGTATCTCCGAGGATTACTGATGAGCAGCAAAAGGAGGCAGATCGACGAGCAAAGTTTGTATATGAGCTTATGATTGATCATGCACCACCAGCAATTGTAGGTCTTGTAGGACGGAAGGAGTATGTACAGTGTGTTAGAGATCTATATTTTTTTCTTCAGTCATCTGTGTGCTTGAAGCAGCTGGCTTTTGACCTCCTTGAGCTGCTCCTGTTGCAAGCATTTCCAGAACTAGATGATGTATTCAAGAAAGTGCATGAAGAAAAGCATAGATTTGGGGAATTCATAGCACCAAAGTGA 3378 0.415 MANQVTVRDLAEEAKKRIVILLVSVVGLSYLMSLTSSTVWVNLPVAASLIIFLRYLSLDFEMKRKTAAYNNKAGSTNVQSSKKPIESSKVVAKFEWRKKVNSPVVEDAIDHFTRHLVSEWVTDLWYSRITPDKEAPEELVQLINGVLGEISGRMRNINLIDLLIRDLINLICTHLELFRAANSKIQKMHKGPLTIESRDMELKIVLASENKLHPALFSAEAEHKVLQHLMNGLMSVTFKSEDLQCSFFRCTVRELLSCTVMRPVLNLANPRFINERIENVVINKTKINPGIAVAQDASQTNADELQTSSDHFSDCLDPSVSGVELVQLKNAPSKNAGSSAKNKAYDNTKDPLLSVDARSSRSWSSLPGNAQINLEQGIQRHRSGGEWGDILDVISRRKTEALAPEHFENMWTKGKNYNQKDDENQPIGRPQLPVAGQSRRVDHMKTKSGTQGKGTNSKMIPPKGSQINSGYSSPLTGEHTPFHADKNGSASSTVPSYKDDEHERIHMQVGDSGSTSSYTSEDDDPNTVTGLDSPVTKVWDGKTNRNQAVSYVHHPLENFDNHGTKKRNKSHSRYPKLRRTRSGSKRSRSSDHDPNTWEEVERTSFLSGDGQDILSVSKHTNSDDSSDDADTESLGRIYSGAAASSSASSISKAESCSLVVNPRKSSSAIGSFFKLRCEVLGANIVKSGSKSFAVYCILVTDVNNNSWSIKRRFRHFEELHRRLKEFPEYNLHLPPKHFLSTGLDVPVILERCEWLDKYLKELVQLPTVSESIEVWDFLSVDSQTYIFTNSFSITETLPVGLHAKPSEKTKSSSNFAAPASDVFATRRENYSADSKEAILQTRNNAAVDGLKSKANGMPLSLPKRNAQEPIKPVDKSGSNADIIPSKTVSSLNNVQKTVKRDGSEVSNVQHDTSDGFPTEWVPPNLSVPILDLVDVIFQLQDGGWIRRKAFWVAKQVLQLGMGDAFDDWLIEKIQLLRKGSVVASGVSRVEQILWPDGIFLTKHPNRRPPPSPAKTSESSPPGQKPAEVSPRITDEQQKEADRRAKFVYELMIDHAPPAIVGLVGRKEYVQCVRDLYFFLQSSVCLKQLAFDLLELLLLQAFPELDDVFKKVHEEKHRFGEFIAPK* 1126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0068 1125 Pfam Sorting nexin C terminal 944 1082 IPR013937 -
Amo09g0068 1125 ProSiteProfiles PX domain profile. 673 785 IPR001683 GO:0035091
Amo09g0068 1125 MobiDBLite consensus disorder prediction 1000 1037 - -
Amo09g0068 1125 SMART PXA_3 106 287 IPR003114 -
Amo09g0068 1125 Pfam PXA domain 102 279 IPR003114 -
Amo09g0068 1125 MobiDBLite consensus disorder prediction 566 583 - -
Amo09g0068 1125 Gene3D - 674 789 IPR036871 GO:0035091
Amo09g0068 1125 MobiDBLite consensus disorder prediction 448 476 - -
Amo09g0068 1125 MobiDBLite consensus disorder prediction 584 599 - -
Amo09g0068 1125 MobiDBLite consensus disorder prediction 416 632 - -
Amo09g0068 1125 SUPERFAMILY PX domain 674 782 IPR036871 GO:0035091
Amo09g0068 1125 PANTHER PHOX (PX) DOMAIN-CONTAINING PROTEIN 3 1121 - -
Amo09g0068 1125 ProSiteProfiles PXA domain profile. 102 285 IPR003114 -
Amo09g0068 1125 MobiDBLite consensus disorder prediction 853 884 - -
Amo09g0068 1125 PANTHER PX SERINE/THREONINE KINASE PXK 3 1121 - -
Amo09g0068 1125 MobiDBLite consensus disorder prediction 509 551 - -
Amo09g0068 1125 Pfam PX domain 704 781 IPR001683 GO:0035091
Amo09g0068 1125 SMART PX_2 671 781 IPR001683 GO:0035091
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0068 Amo-Chr9 751846 760275 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0068 K17925 - gmx:100790491 1607.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0234 19 2729575 2738117 Amo09g0068 09 751846 760275 hybridization