Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0057 ATGATAATTGGAGCAGGAATGAGTGCAACAGCAAATAGCCTGTGGGGCATGCTTTTGGGAAGGTTATTTGTTGGTACCGGAATGGGACTTGGCCCACCTGTTGCTGCTCTTTATGTGGCTGAGGTATCACCTCCAGCTGTGCGGGGTACTTTTGGGGCTTTAACTCAGATTGCAACATGTCTTGGACTTATGGGTTCTTTCTTTATAGGAATCCCAGCCAAGGAAATAGTGGGTTGGTGGCGGATTTGTTTCTGGGTATCCATCATTCCTGCTGGAGTGCTTGCCATTTGCATGGAGATCAGTGCAGAGAGTCCACACTGGCTCTTCAAGAGAGGAAGAACCATTGAAGCTGAGGCTGAATTTGAGAAGCTCTTGGGAGGAGTAAATGTGAAATCRGCAATGGCTGACCTGTCAAAGTCTGATAGAGGTGATGAGTCTAGTTCTGTAAAACTATCGGAATTACTCTGTGGCTGCCATGCTAGAGTGATGTTCATTGGTTCTGTGCTTTTTGCTTTACAGCAGCTATCTGGCATAAATGCTGTGTTCTATTTCTCKTCGACWGTCTTTGAAAGCTTTGGTGTACCATCTGATCTTGCAAATARGAGCGTGGGAGTTTGCAATTTATTGGGATCAATTGTAGCAATGATTCTGATGGATAAACTTGGAAGAAAAGTGCTTCTCATGGGTAGCTTTTTCGGCATGGCAGTAGCGATGGGTCTACAAGTTCTTGCTGCAAGTTCATTTGCTGCAGGATCTGGAGCAATGTATCTATCCGTTGGTGGCATGTTGCTGTTTGTGCTATCATTTGCACTCGGGGCCGGTCCAGTTCCTTGTCTCGTTATGTCTGAAATGCTACCCGGCAAGATCAGAGCAAAGGCGATGGCAATTTGCTTGGCTGCGCACTGGGTGATAAACTTCTTTGTGGGTCTACTATTTCTGCGCTTGCTGGAGCAAATTGGGGCACAACTCTTGTATAGTATTTTTGGTTCATTCTGTCTGATAGCAGTGGCTTTTGTGAAGAAGTATATTCTTGAAACAAAAGGGAAGTCACTACAGGAAATTGAGATAGCACTTCTTGCTCAAGAAGCATCATAA 1095 0.4484 MIIGAGMSATANSLWGMLLGRLFVGTGMGLGPPVAALYVAEVSPPAVRGTFGALTQIATCLGLMGSFFIGIPAKEIVGWWRICFWVSIIPAGVLAICMEISAESPHWLFKRGRTIEAEAEFEKLLGGVNVKSAMADLSKSDRGDESSSVKLSELLCGCHARVMFIGSVLFALQQLSGINAVFYFSSTVFESFGVPSDLANXSVGVCNLLGSIVAMILMDKLGRKVLLMGSFFGMAVAMGLQVLAASSFAAGSGAMYLSVGGMLLFVLSFALGAGPVPCLVMSEMLPGKIRAKAMAICLAAHWVINFFVGLLFLRLLEQIGAQLLYSIFGSFCLIAVAFVKKYILETKGKSLQEIEIALLAQEAS* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0057 364 CDD MFS_GLUT_like 1 345 - -
Amo09g0057 364 Pfam Sugar (and other) transporter 1 356 IPR005828 GO:0016021|GO:0022857|GO:0055085
Amo09g0057 364 Gene3D MFS general substrate transporter like domains 1 359 IPR036259 -
Amo09g0057 364 PANTHER PLASTIDIC GLUCOSE TRANSPORTER 3-RELATED 1 361 - -
Amo09g0057 364 SUPERFAMILY MFS general substrate transporter 1 355 IPR036259 -
Amo09g0057 364 PRINTS Sugar transporter signature 259 280 IPR003663 GO:0016020|GO:0022857|GO:0055085
Amo09g0057 364 PRINTS Sugar transporter signature 173 183 IPR003663 GO:0016020|GO:0022857|GO:0055085
Amo09g0057 364 PRINTS Sugar transporter signature 18 37 IPR003663 GO:0016020|GO:0022857|GO:0055085
Amo09g0057 364 PRINTS Sugar transporter signature 282 294 IPR003663 GO:0016020|GO:0022857|GO:0055085
Amo09g0057 364 ProSitePatterns Sugar transport proteins signature 1. 214 230 IPR005829 GO:0016021|GO:0022857|GO:0055085
Amo09g0057 364 PANTHER - 1 361 IPR045263 -
Amo09g0057 364 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 347 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0057 Amo-Chr9 665855 669226 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0057 7 361 Organic Solute Cotransporters AT1G79820 58.592 2.59e-140 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0057 - - aprc:113857086 622.854