Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo09g0053 | ATGAGCTATGCACAACACTCTCCTCCTTTGGGGTCTGGTAGTAAAACACCTACTAGCAGAAGAACTTTTGAGTTTGGAAAGACACATGTAGTGAGGCCAAAAGGGAAACACCAAGCTACTATAGTTTGGCTCCATGGTCTTGGTGACAATGGGTTGAGCTCATCTCAGCTCCTGGAATCCCTCCGTCTTCCAAATATAAAATGGATTTGTCCAACTGCTCCAATCCGTCCAGTAAAGACACTTGGCGGTTTTTCTTGCACTTCATTGAAAGTTGGAATAGGAGGGTTCAGCATGGGAGGAGCAGTAGCAGCATATTCAGCAACATGCTATGCAATGGGAAGCTTCTCAAATGGAATGCCTTACCCTCTCTCCAACCTCACTTCTGTTCTTGCTCTTAGTTCATGGCTTCCTGGGGGACCCACTTGTAGGACCCTTTTAAGGAACAACAACAACAACGTTAACACCATACATGCTAAGACTCGAGCTGCTTCATTGCCTATTTTCCTTGCACATGGAATTGCTGACGATGTTGTGCTCTATAAATACGGACACCAATCTGCTCACTCCTTATATTCTGCT | 579 | 0.4508 | MSYAQHSPPLGSGSKTPTSRRTFEFGKTHVVRPKGKHQATIVWLHGLGDNGLSSSQLLESLRLPNIKWICPTAPIRPVKTLGGFSCTSLKVGIGGFSMGGAVAAYSATCYAMGSFSNGMPYPLSNLTSVLALSSWLPGGPTCRTLLRNNNNNVNTIHAKTRAASLPIFLAHGIADDVVLYKYGHQSAHSLYSA | 193 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo09g0053 | 193 | SUPERFAMILY | alpha/beta-Hydrolases | 29 | 191 | IPR029058 | - | |
| Amo09g0053 | 193 | Gene3D | alpha/beta hydrolase | 19 | 193 | IPR029058 | - | |
| Amo09g0053 | 193 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Amo09g0053 | 193 | Pfam | Phospholipase/Carboxylesterase | 28 | 83 | IPR003140 | GO:0016787 | |
| Amo09g0053 | 193 | PANTHER | ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN | 1 | 88 | - | - | |
| Amo09g0053 | 193 | PANTHER | ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN | 90 | 193 | - | - | |
| Amo09g0053 | 193 | PANTHER | ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN | 1 | 88 | - | - | |
| Amo09g0053 | 193 | PANTHER | ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN | 90 | 193 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Amo09g0053 | Amo-Chr9 | 587564 | 591332 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Amo09g0053 | 20 | 192 | Acyl Lipid Metabolism Gene Families | AT5G20060 | 50.000 | 6.37e-64 | 196 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amo09g0053 | K06130 | - | gmx:100781212 | 231.491 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Amo09g0053 | 09 | 587564 | 591332 | Amo09g0053 | 09 | 587564 | 591332 | PCT |