Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0048 ATGGCATTCACAACAACCACACCTCAAAACCTCACCACCTTCACCACCTCCTCACACAAACCCAAACTTCCATTCTCTCCCTCTCACTCCCTCACATTCCCCACTCACWCAAACCAAACCCTAACTTCACGCGCCATCTCCACCGCCATTTCCACCTCCACGCGCATCCACTCTCTCTTCACMCCACGCGCCACCTCATCCCCTTCTTCCTCCACCACCGCCGCAGAAACAACCTTCCACGGCCTCTGCTACGTCGTCGGCGAYAACATCGACACCGACCAAATCATCCCCGCTGAGTACCTCACTCTCGTYCCGTCAAAACCCGACGAGTACGAGAAGCTGGGAACCTACGCGCTCATCGGCCTCCCGTCCTCCTACGCCACGCGTTTCRTCGAGCCCGGCGAGTCGAAAACCAAGTACACAGTCGTCATCGCCGGCGCCAACTTCGGCTGCGGATCATCCCGTGAACACGCGCCAGTTGCGCTTGGCGCGTCGGGTGCAGCGGCMGTGGTTGCGGAGTCATACGCGAGGATATTCTTCCGGAACTCRGTGGCGACCGGAGAAGTTTACCCGCTGGAATCGGAGGGGAGGTTGTGTGAGGAGTGTAGGACTGGTGATGTTGTTACGATTGAGSTGAAGGAGAGTAAGCTGATCAATCATACCACTGGAAAGGAGTATGCGCTGAAGTCAATTGGAGATGCCGGCCCTGTTATCGAGGCCGGYGGGATCTTCGCTTATGCGAGGAAGACCGGCATGATTCCGTCTCATTGA 771 0.5655 MAFTTTTPQNLTTFTTSSHKPKLPFSPSHSLTFPTHXNQTLTSRAISTAISTSTRIHSLFTPRATSSPSSSTTAAETTFHGLCYVVGDNIDTDQIIPAEYLTLVPSKPDEYEKLGTYALIGLPSSYATRFXEPGESKTKYTVVIAGANFGCGSSREHAPVALGASGAAAVVAESYARIFFRNSVATGEVYPLESEGRLCEECRTGDVVTIEXKESKLINHTTGKEYALKSIGDAGPVIEAGGIFAYARKTGMIPSH* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0048 256 PANTHER 3-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNIT 2-RELATED-RELATED 1 254 - -
Amo09g0048 256 Pfam Aconitase C-terminal domain 139 187 IPR000573 -
Amo09g0048 256 TIGRFAM LEUD_arch: 3-isopropylmalate dehydratase, small subunit 83 249 IPR011827 GO:0016836
Amo09g0048 256 Gene3D Aconitase, domain 4 76 252 IPR015928 -
Amo09g0048 256 CDD IPMI_Swivel 85 210 IPR033940 -
Amo09g0048 256 PANTHER 3-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNIT 2-RELATED 1 254 - -
Amo09g0048 256 MobiDBLite consensus disorder prediction 1 29 - -
Amo09g0048 256 SUPERFAMILY LeuD/IlvD-like 78 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0048 Amo-Chr9 533336 536205 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0048 K01704 - twl:119987420 323.553