Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0043 ATGGAGGCCTTACAGTTGCAGAGTTTGTTTCCCAGAACATTATCCACACTTTCATCATCTCCAAGAGTAAGAACATCATCATCATCATCATCATTGCAACTCAACATCTTCATTAGCAACCATAAAGCATTGAGCTTGACCTCATCATCTTCTTGTTCTTCAACCGTGGCTGTTAGAGCAGGATGGTTCTTGGGCCTCACAGACAGCAAGAACAAGAAGATGGGTTTGCCCGAGACAGTGAAAGCAGGTGACCCAGTTCTGCATGAGCCTGCAGAGGATGTGGATCCCAATGAGGTTAGGTCTGAGAGGATTCAGAAGATCATTGATGACATGATCAGGGTCATGAGAAAAGCTCCTGGTGTTGGCCTTGCTGCTCCCCAGATTGGTGTTCCATTAAGGATAATTGTTTTGGAAGATACCACAGAGTATATTGGTTATGCACCAAAGGAAGAAGTCAAAGCTCAAGATAGAAGACCTTTTGAACTTTTGGTGATCCTGAATCCCAAACTCCTGAAAAAGAGCAACAAGACTGCCCTATTTTTTGAAGGATGCCTAAGTGTTGATGGATTCAGAGCATTGGTGGAGCGACATCTTGACGTCGAGGTCACCGGTTTGGATCGTTATGGCGAACCAATCAAAGTAACAGCTTCCGGTTGGCAGGCGCGGATTTTACAACACGAGTGTGATCACTTGGAAGGAACTCTTTATGTTGACAAGATGGTGCCTAAAACTTTCAGAACAGTAGAAAACCTGACCCTGCCTCTTGCTAAGGGGTGCCCCAAACTCGGCTCTCGCTAG 798 0.4549 MEALQLQSLFPRTLSTLSSSPRVRTSSSSSSLQLNIFISNHKALSLTSSSSCSSTVAVRAGWFLGLTDSKNKKMGLPETVKAGDPVLHEPAEDVDPNEVRSERIQKIIDDMIRVMRKAPGVGLAAPQIGVPLRIIVLEDTTEYIGYAPKEEVKAQDRRPFELLVILNPKLLKKSNKTALFFEGCLSVDGFRALVERHLDVEVTGLDRYGEPIKVTASGWQARILQHECDHLEGTLYVDKMVPKTFRTVENLTLPLAKGCPKLGSR* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0043 265 CDD Pep_deformylase 80 236 IPR023635 GO:0042586
Amo09g0043 265 TIGRFAM pept_deformyl: peptide deformylase 80 243 IPR023635 GO:0042586
Amo09g0043 265 Pfam Polypeptide deformylase 80 243 IPR023635 GO:0042586
Amo09g0043 265 Gene3D Peptide deformylase 76 265 IPR036821 -
Amo09g0043 265 PANTHER PEPTIDE DEFORMYLASE 31 264 - -
Amo09g0043 265 Hamap Peptide deformylase [def]. 75 251 IPR023635 GO:0042586
Amo09g0043 265 PANTHER PEPTIDE DEFORMYLASE 31 264 IPR023635 GO:0042586
Amo09g0043 265 SUPERFAMILY Peptide deformylase 74 248 IPR036821 -
Amo09g0043 265 PRINTS Peptide deformylase signature 109 138 IPR023635 GO:0042586
Amo09g0043 265 PRINTS Peptide deformylase signature 182 193 IPR023635 GO:0042586
Amo09g0043 265 PRINTS Peptide deformylase signature 194 212 IPR023635 GO:0042586
Amo09g0043 265 PRINTS Peptide deformylase signature 213 242 IPR023635 GO:0042586
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0043 Amo-Chr9 498466 501492 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0043 K01462 - gmx:100784292 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo09g0043 09 498466 501492 Amo09g0043 09 498466 501492 PCT