Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0026 ATGGCTCTGATCACATCACAGCCTAAACACCCTCTTCTTAACCAAATTACCACTGTTCACTGTGCAATTCCAAGGTTGAACAAAACTGTGATTGGTCTTGGATCCTTCACAAACAATGTTAAAACCATTAAAGTTTGTAACTTTAACTCAAACCCAAGAAAATTCACTCTTCAAAATCACAACTTTATTACCTATAACAATAACAAGAAGCCAATAACAGCAGCAAATGCTGCATTTTCCTCAGAACCTTTGGTGCCACCAGAACAAGAACAACAAGAGCAAGGGCCATTGAGGAATCAGAGAAGGATTCTGCTATCTGATGTGGTTGTGGAGAGAGAGAGGAAAGTGTTATTTGGAAGGAAATGGAACTCATTGGATGTTGGAACTGCTGGTGTTGTTCTTGCCATGCATGTTCTTAGTCTCTTTGCACCATTTCAATTCAATTTCCATGCTCTTTGTGTTGCTTTGGCTTTGTATGTTGTGACTGGTCTATTTGGTATCACACTCTCTTTCCATAGAAACCTTTCTCATAGGAGCTTCAAGCTTCCCAAATGGCTTGAATATACATTTGCCTATTGTGGAGTTCTTGCTCTTCAGGGTAACCCAATTGATTGGGTTAGCACTCATAGGTACCATCACCAATTCTGTGATTCAGAGAGAGACCCTCATAGCCCCACTGAAGGATTCTGGTTCAGCCATATGAGTTGGCTATTTGATACAAATTCTATCATAGAAAGGTGTGGGGAGACAAACAATGTTGGTGATTTAGAGAAACAATCTTTTTATAGGTTTATAAGAAGTAGTTACATTGTTCATCCACTTGCTTTGGGAGCTCTTCTTTATGCCATTGGAGGATTTCCTTTTCTTGTTTGGGGAATGGGTGTGAGGATTGTTTGGGTGTACCACATAACTTGGTTGGTAAATTCAGCTTGCCATGTATGGGGGAATCAATCATGGAACACCAAGGACTTATCCAGAAACAATTGGTGGGTGGCATTGCTTGCATTTGGTGAAGGTTGGCACAACAACCACCATGCATTTGAGTATTCAGCTAGACATGGCTTAGAGTGGTGGCAATTGGACATGACTTGGTATGTGGTTAGGTTCTTACAAGCAATTGGATTGGCCACTGATGTGAAGCTACCCTCTCAAAGTCACAAGCAAAAAATGGCATTCAATTGA 1182 0.4069 MALITSQPKHPLLNQITTVHCAIPRLNKTVIGLGSFTNNVKTIKVCNFNSNPRKFTLQNHNFITYNNNKKPITAANAAFSSEPLVPPEQEQQEQGPLRNQRRILLSDVVVERERKVLFGRKWNSLDVGTAGVVLAMHVLSLFAPFQFNFHALCVALALYVVTGLFGITLSFHRNLSHRSFKLPKWLEYTFAYCGVLALQGNPIDWVSTHRYHHQFCDSERDPHSPTEGFWFSHMSWLFDTNSIIERCGETNNVGDLEKQSFYRFIRSSYIVHPLALGALLYAIGGFPFLVWGMGVRIVWVYHITWLVNSACHVWGNQSWNTKDLSRNNWWVALLAFGEGWHNNHHAFEYSARHGLEWWQLDMTWYVVRFLQAIGLATDVKLPSQSHKQKMAFN* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0026 393 CDD Delta9-FADS-like 151 380 IPR015876 GO:0016717
Amo09g0026 393 PRINTS Fatty acid desaturase family 1 signature 172 192 IPR015876 GO:0016717
Amo09g0026 393 PRINTS Fatty acid desaturase family 1 signature 209 238 IPR015876 GO:0016717
Amo09g0026 393 PRINTS Fatty acid desaturase family 1 signature 294 315 IPR015876 GO:0016717
Amo09g0026 393 PRINTS Fatty acid desaturase family 1 signature 337 351 IPR015876 GO:0016717
Amo09g0026 393 Pfam Fatty acid desaturase 155 368 IPR005804 GO:0006629
Amo09g0026 393 PANTHER BNAC05G37460D PROTEIN 99 392 - -
Amo09g0026 393 PANTHER ACYL-COA DESATURASE 99 392 IPR015876 GO:0016717
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0026 Amo-Chr9 303455 305625 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0026 33 393 Lipid Metabolism Gene Families AT3G15850 65.041 4.12e-178 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0026 K20416 - gmx:100527024 639.417