Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0013 ATGGCTCTGCGAACAGTGACTCGAAAGTTGGGCAATAAGTTGTTTCCTCTCTTGTCTTCCACATCCCACCTCCATTCGCATGCCACCAGTTTTGGATTCAAGGAAGTGAAAGAAGAAGAAAAGGCTGCAATGGTTGGGAATGTCTTCTCAAACGTTGCTTCTAACTATGACCTCATGAATGATCTCATGAGTGCAGGGTTGCACCGGTTGTGGAAGGACAGACTGGTTTCAAAGCTCAATCCTTTTCCTGGAATGAAGCATCTTGATGTGGCTGGTGGCACAGGGGATGTTGCTTTCAGAATCTTAGAAAGGATAAACAGAGTTAAGCAAAGAGGAATTCAACGTGATTTTGAAGATATATTAGAGGCAGAAACTAAGATATATGTGTGTGATATTAACCCTAACATGTTAAATGTTGGCAAACAGCGGGCCTTGCAGAAAGGTTTTGCTGAAGACGGTTCCCTTGTATGGGTGGAGGGAAATGCTGAAAGCTTGGGATTCCAAAATGATTCAATGGATGGTTACACTATAGCATTTGGGATACGGAATGTCACACACATAGAGAAAGTTCTCAGTGAAGCTCATAGGGTACTGAAGCGTGGAGGCAGGTTCCTTTGCCTTGAACTTAGCCATGTGGGAATTCCTGTATTTAAAGAATTGTATGATTTATATTCTTTCTCCGTTATTCCATCTATGGGAGAGATGGTTGCTGGTGACCGTGAATCTTATCAGTACTTAGTTGAGAGTATCCGGCGTTTCCCTACACAGGAGAAATTTGCATCAATGATTGCTGATGCAGGGTTCCAGAAAGTAGAGTATGAGAATCTAGTAGGGGGAGTGGTTGCCGTCCATTCAGGGGTCAAAATCTGA 870 0.4322 MALRTVTRKLGNKLFPLLSSTSHLHSHATSFGFKEVKEEEKAAMVGNVFSNVASNYDLMNDLMSAGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILERINRVKQRGIQRDFEDILEAETKIYVCDINPNMLNVGKQRALQKGFAEDGSLVWVEGNAESLGFQNDSMDGYTIAFGIRNVTHIEKVLSEAHRVLKRGGRFLCLELSHVGIPVFKELYDLYSFSVIPSMGEMVAGDRESYQYLVESIRRFPTQEKFASMIADAGFQKVEYENLVGGVVAVHSGVKI* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0013 289 Gene3D Vaccinia Virus protein VP39 51 289 IPR029063 -
Amo09g0013 289 CDD AdoMet_MTases 86 206 - -
Amo09g0013 289 Pfam ubiE/COQ5 methyltransferase family 40 288 IPR004033 GO:0008168
Amo09g0013 289 PANTHER 2-METHOXY-6-POLYPRENYL-1,4-BENZOQUINOL METHYLASE, MITOCHONDRIAL 1 288 - -
Amo09g0013 289 ProSiteProfiles UbiE family SAM-binding methyltransferase profile. 40 288 IPR004033 GO:0008168
Amo09g0013 289 ProSitePatterns ubiE/COQ5 methyltransferase family signature 1. 56 71 IPR023576 GO:0008168
Amo09g0013 289 Hamap Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 36 288 IPR004033 GO:0008168
Amo09g0013 289 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 37 282 IPR029063 -
Amo09g0013 289 PANTHER METHYLTRANSFERASE 1 288 - -
Amo09g0013 289 ProSitePatterns ubiE/COQ5 methyltransferase family signature 2. 196 210 IPR023576 GO:0008168
Amo09g0013 289 TIGRFAM MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 45 288 IPR004033 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0013 Amo-Chr9 178343 182571 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0013 K06127 - gmx:100794692 483.411