Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2493 ATGAAAACCAGAGCTAGAACTCGAAAGGTTCTTGCTGCTGATAATGGCGATGATCAAGTGGGTGTTGTGAAGCAAGATACAGAAGTAAGCCCAAGATGTAGAATTGAGCTTGTCTATAGTCGTCGAGGAAAGAAAAGTGAGCCCGTAATAGATGTGACAAGAAGTGTTACCAACTCATTGCCCTGTTATTTGAGTGACATGACTCGGAAAGTGCAATCAAAGAGGAAGAGAAAATCTGATGACGAGGAAGAACTCTGTAAACCCAGAGAAAAGCTAGACAGTGGATTGTTCGGTGAATACTTGGAGAAAATATGGAGGAGTTTCTCGGAAGAGAAGAGAAGGCGCAGCACATACTTTGACAGCTTATGGTTTAGCCTATACAGGAGGGCCTCATGTAAAGAGAAGGTGCTGACTTGGATAAAAAAGGCGCATATTTTCTCAAAGGCATATGTTTTTGTTCCAATAGTTTGCTGGGGTCACTGGAGCCTTTTGATCTTCTGCCATTTTGGTGAGAGCGCGCAAACAAATACCAGATCACGTTGCATGTTGTTGCTAGATTCTCTTGCAATGGCGAATCCAAGGCGACTTGAACCGGAGATAAGAAGATTTGTTCTAGATATTTATCAGGCAGCGGACAGGCCAGAAACTAAGAAAATCGTATCTCGAATTCCGTTGTTGATTCCTAAGGTGCCACAACAAAGAGACGGTAATGAATGTGGAAACTTTGTTCTCTATTTCATTAAACTGTTTCTTAGTGTCGCCCCCGATGATTTTAGCATGGAAGGGTATCCTTACTTTATGAAAAAAGATTGGTTTACCCACGAAGGCTTGGATAGGTTTCTTGAGGGACTTGATTCAATGGGCTAG 867 0.4233 MKTRARTRKVLAADNGDDQVGVVKQDTEVSPRCRIELVYSRRGKKSEPVIDVTRSVTNSLPCYLSDMTRKVQSKRKRKSDDEEELCKPREKLDSGLFGEYLEKIWRSFSEEKRRRSTYFDSLWFSLYRRASCKEKVLTWIKKAHIFSKAYVFVPIVCWGHWSLLIFCHFGESAQTNTRSRCMLLLDSLAMANPRRLEPEIRRFVLDIYQAADRPETKKIVSRIPLLIPKVPQQRDGNECGNFVLYFIKLFLSVAPDDFSMEGYPYFMKKDWFTHEGLDRFLEGLDSMG* 289
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2493 288 Gene3D Adenoviral Proteinase; Chain A 51 273 - -
Amo08g2493 288 PANTHER UBIQUITIN-LIKE PROTEASE 4-RELATED 58 286 - -
Amo08g2493 288 Coils Coil 64 84 - -
Amo08g2493 288 Pfam Ulp1 protease family, C-terminal catalytic domain 105 270 IPR003653 GO:0006508|GO:0008234
Amo08g2493 288 SUPERFAMILY Cysteine proteinases 84 266 IPR038765 -
Amo08g2493 288 ProSiteProfiles Ubiquitin-like protease family profile. 75 250 IPR003653 GO:0006508|GO:0008234
Amo08g2493 288 PANTHER CYSTEINE PROTEINASES SUPERFAMILY PROTEIN 58 286 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Amo08g2493 Amo-Chr8 38752126 38755035 Wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2493 - - ahf:112783467 459.529