Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2480 TTCCCCGTCGACGAAACCTTACCCGAAAACTTCGTCCACAGGAACAAAGAAACCGAAGACGAAGCTCGCCGCCGAAACTGGATCGACCGCGGTTGGGCGCCATGGGAGGAAATCCTCACTCCCGAAGCCAATTTCGCTCGGAAGAGCCTCAACGAAGGCGAAGAGGTGCCTCTGAAAACTCCCGAAGCCATTGAAGCGTTCAACATGCTGAGCCCTAGCTACAGGAAGAAGAAGATGGAGGAATTGGGGATGGACGAGGACGAATTCTCTGAGAAGCAGTTTGAGATCAAAGGGGAGATTCCGGAGCCTATTGAGACGCTTTGGGCGGGTCCTATGGTGGTGCGCTTGGTGCCGCCGAGGGATTGGCCGCCGCGGGGATGGGAGGTGGATAGGGAGGAGCTGGCGTTCATGAGGGAGGCGCATAAGATGCTGGCCAGGAGAGTGAGTTTGGAACAACTTGAAGGTGGTGTGATTGTGGATGAAGACTATGATACTGGTGGGCTTGCATTGGATAGGTACAAGGTGTTCTTGAAGCAGTATGAGGAATGGGTTGAAGCTAATAGGGATAGGTTGGAGGAGGAATCTTATCTGGTGCCTCTGAAAACTCCCGAAGCCATTGAAGCGTTCAACATGCTGAGCCCTAGCTACAGGAAGAAGAAGATGGAGGAATTGGGGATGGACGAGGACGAATTCTCTGAGAAGCAGTTTGAGATCAAAGGGGAGATTCCGGAGCCTATTGAGACGCTTTGGGCGGGTCCTATGGTGGTGCGCTTGGTGCCGCCGAGGGATTGGCCGCCGCGGGGATGGGAGGTGGATAGGGAGGAGCTGGCGTTCATGAGGGAGGCGCATAAGATGCTGGCCAGGAGAGTGAGTTTGGAACAACTTGAAGGTGGTGTGATTGTGGATGAAGACTATGATACTGGTGGGCTTGCATTGGATAGGTACAAGGTGTTCTTGAAGCAGTATGAGGAATGGGTTGAAGCTAATAGGGATAGGTTGGAGGAGGAATCTTATCTGCATGACCAAGATTATCACCCTGGTAGGAGGAAAAGAGGGAAAGACTACAAGGAGGGCATGTATGAGCTTCCATTCTATTATCCTGGTCAAATTTGTGAAGGGATGGTGACAACTTTGCATCTCTATCAAGGGGCATTTGTTGACATTGGCGGCGTATATGAGGGGTGGGTTCCCATAAAGAACAATGACTGGTATTGGATCCGCCATCACATAAAAGTGGGTATGCATGTCATGGTTGAAGTTTTGAGAGATCCCTACCGTTTCCGATTTCCGATCGAACTTCGGTTTGTCCATCCAAATATAGATCATCTGATCTTTAACAGATTCGAGTACCCACCAATATTTCAACGTAACGATACTAACCCAGATGAAATACGGCGAGACTGTGGAAGGCCTCCCATTCCTAGGAAAGATCCTGGAGACAAGCCGGAGGAAGAACCTTTGTTGTCAGATCACCCATATGTTGACAAGTTATGGCAGATTAATGCAGCTGAGCAAATGATTTTGACGGATATGGAGGTTAATCCAGATAAATATAAAGGCAAAAAGCTGTCAGAGTTGACTGATGAAGAAGACTTTGATGAACAAAATTCTGTTCAGCATACAGAAGTCAAATATAAGAACACAATATTACCCAAGACTATTCTGAAAGTAAGTGTCAAAGAGCTTGACTTAGAGGCTGCATTTGCTGAGCGTCAGCACCATAATAAACAATTTGCGGAAGCAAAAGCCAGAGGCGAGGAGTACGAAGTTTCCAAATTAAGGCGTCACATCGAGATGGATGAGTATGTGGATGCCAGTCACTTTGGTAAAGACCAATTTGATCCTGAAAATCCTTTATATCGTTATGATTATTGGGGAGAACCCAAGAATTCAGAGAAGAGCAGGCTAGAACGCATAGCAGATCAACATAACAAATCAATTGTGGGGAAGGGCACTGTTTGGTATGAGATGTCATATGAAGACTGCATCAAGCAACAAGAAGTAAGAAAAGCCCAGGCCAAGAGAGAGAGGGAAGAAGAACGGAGGAATGCAGATAACAAGCAAGATCAGGGCTCAAATGAGGACGAAGATTCTGATTCTGATGACGACTTTGACTTTAGCCTGCTGAGAAATGTAGATGGCAACTTGTCTGAACAGATTCATGTTAATGGAACCGAGTCTTTCAAAATGTCAGACGAGGGTATGTTTGAGGAGTGA 2217 0.4732 FPVDETLPENFVHRNKETEDEARRRNWIDRGWAPWEEILTPEANFARKSLNEGEEVPLKTPEAIEAFNMLSPSYRKKKMEELGMDEDEFSEKQFEIKGEIPEPIETLWAGPMVVRLVPPRDWPPRGWEVDREELAFMREAHKMLARRVSLEQLEGGVIVDEDYDTGGLALDRYKVFLKQYEEWVEANRDRLEEESYLVPLKTPEAIEAFNMLSPSYRKKKMEELGMDEDEFSEKQFEIKGEIPEPIETLWAGPMVVRLVPPRDWPPRGWEVDREELAFMREAHKMLARRVSLEQLEGGVIVDEDYDTGGLALDRYKVFLKQYEEWVEANRDRLEEESYLHDQDYHPGRRKRGKDYKEGMYELPFYYPGQICEGMVTTLHLYQGAFVDIGGVYEGWVPIKNNDWYWIRHHIKVGMHVMVEVLRDPYRFRFPIELRFVHPNIDHLIFNRFEYPPIFQRNDTNPDEIRRDCGRPPIPRKDPGDKPEEEPLLSDHPYVDKLWQINAAEQMILTDMEVNPDKYKGKKLSELTDEEDFDEQNSVQHTEVKYKNTILPKTILKVSVKELDLEAAFAERQHHNKQFAEAKARGEEYEVSKLRRHIEMDEYVDASHFGKDQFDPENPLYRYDYWGEPKNSEKSRLERIADQHNKSIVGKGTVWYEMSYEDCIKQQEVRKAQAKREREEERRNADNKQDQGSNEDEDSDSDDDFDFSLLRNVDGNLSEQIHVNGTESFKMSDEGMFEE* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2480 738 MobiDBLite consensus disorder prediction 671 693 - -
Amo08g2480 738 MobiDBLite consensus disorder prediction 712 726 - -
Amo08g2480 738 MobiDBLite consensus disorder prediction 459 488 - -
Amo08g2480 738 MobiDBLite consensus disorder prediction 456 488 - -
Amo08g2480 738 MobiDBLite consensus disorder prediction 671 738 - -
Amo08g2480 738 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 10 602 724 IPR044967 GO:0000427|GO:0003723
Amo08g2480 738 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 10 1 197 IPR044967 GO:0000427|GO:0003723
Amo08g2480 738 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 10 198 602 IPR044967 GO:0000427|GO:0003723
Amo08g2480 738 Coils Coil 663 690 - -
Amo08g2480 738 Gene3D - 365 434 IPR012340 -
Amo08g2480 738 ProSiteProfiles S1 domain profile. 368 434 IPR003029 GO:0003676
Amo08g2480 738 SUPERFAMILY Nucleic acid-binding proteins 364 422 IPR012340 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2480 - - gmx:100783002 814.298