Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2459 ATGGCACCGCACGATCTCCGCCGTCCATTCAAACGACCGTTGATCTCTGATCAAGAGAAGCGCAGGCAGCAGTCCCTGCTCCGGCAGGCACAGAATCGACGCGACGCCCAGAACCATGCTCGATTCCTCGCCTCCACCGCCTTATCGCTCGAACAACCGCACGAACTCGAACCCGAACCCGAACTTCACGACGAACTTATACCTGACTCTGAAGCTCCCGAGTCACCGAAGGAGCTTGACGTGGTTGAAGCGTCGAAGCTGAAAGGCGCGGAGGCTCGGAAATGGTTCGCGAAACAGCTGATGCATCCCGAATGGATGATCGACATTCCCGAAAATCTCTCACAAGACTGGTTTGTGTTTGCTAGGCCTTCTGGAAAACGATGCTTTGTGGTTTCGTGCAACGGCACGACGATAAGTCGTTTAAGGAACGGTTCGATACTGCACCGTTTTCCGTCGGAGTTACCGAATGGTGCGAGAAGAAAGGATTCCTCTGGTCCTGCTCATTTGATTCTTGTGCACCGATGTGTAGGTTTGCAAGAGTTGAGTTTGGGGGATGTGGATCAGACTTACTATGTGATTGACATGGTTTGCTGGCGGGGCTACTCGCTTTATGATTGCGCCGCAGAATTCAGGTTTTTCTGGTTGAATTCCAAGCTTGCTGAGACTGGCGCTTGTGAACCTCCCTCGCATTATCACAAGTACAGGTTCAGTTTGGTTCCAGTGTACTGCTGTGACCAGAGTGGTTTATGTGCTGCTTATACTGGATCTGTGCCTTATGTCAAAGATGGTCTTCTGTTTTATAACAAGCATGCACACTATCAGACAGGAATTACACCACTAGCATTGGTTTGGAAGGATGAGAACTGCAGTCAGTATGTTATGGACACAGATAGCAAAGGACAGGTTCCAAATCAACAGCAGGTGGTTTTGGAGCTACAAGAAGGTGGAAAGCTGTGCACTTCCGATGATCCTCCTGTAGTATTTGGATGTTTAGATGGAGGCTTTATGCATGAGTCAGAGTTGCATTCAGGATGTCTTGTACGGTTTGCAATTGGAGAAGGGGGACTGGTTTTGGTGGATGGAAAACTTGAGAAAGCTGATCTAAATTATCTAGGCAAGGCCAACCGTGCTCGTGCTTCTGCTGATAGTTTCTCTAAGGTTATGTTCCAATACAGTGTTCGACACTCTCCTCTAAGAATTGATGATTTGTTAGGATCTGTCAACTCAGCAGCTGATGAAAGTAACAAAGTTTGTGATATTGAAATGGATGGTTGA 1275 0.48 MAPHDLRRPFKRPLISDQEKRRQQSLLRQAQNRRDAQNHARFLASTALSLEQPHELEPEPELHDELIPDSEAPESPKELDVVEASKLKGAEARKWFAKQLMHPEWMIDIPENLSQDWFVFARPSGKRCFVVSCNGTTISRLRNGSILHRFPSELPNGARRKDSSGPAHLILVHRCVGLQELSLGDVDQTYYVIDMVCWRGYSLYDCAAEFRFFWLNSKLAETGACEPPSHYHKYRFSLVPVYCCDQSGLCAAYTGSVPYVKDGLLFYNKHAHYQTGITPLALVWKDENCSQYVMDTDSKGQVPNQQQVVLELQEGGKLCTSDDPPVVFGCLDGGFMHESELHSGCLVRFAIGEGGLVLVDGKLEKADLNYLGKANRARASADSFSKVMFQYSVRHSPLRIDDLLGSVNSAADESNKVCDIEMDG* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2459 424 Gene3D DNA ligase/mRNA capping enzyme 2 311 - -
Amo08g2459 424 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 96 285 - -
Amo08g2459 424 MobiDBLite consensus disorder prediction 54 77 - -
Amo08g2459 424 MobiDBLite consensus disorder prediction 29 45 - -
Amo08g2459 424 CDD Snurportin-1_C 95 287 - -
Amo08g2459 424 MobiDBLite consensus disorder prediction 1 28 - -
Amo08g2459 424 PANTHER SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1 1 423 IPR017336 GO:0005634|GO:0005737|GO:0061015
Amo08g2459 424 MobiDBLite consensus disorder prediction 1 77 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2459 K13151 - gmx:100801927 639.802