Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2456 TGCAAGAGATTGAACCGTTTAGGCCTGAACCGTGTCGTTTTATCCAAAGCTGGTCCAAAACTATTCGCCATTAAAGCCAAAAACTGGTCGGAATCAGCTCACCGGTTTCTCAGAAACTGCGTTAACGCCGGGAACCTCCACGCATCCTACACTCTCGGAATGATCCGATTTTACTGTTTGGAAAACAGGGAGAGCGGGTTATCGTTGATGGCGAAGGCTGCGATGAAATCTCACGCGCCGGCTCTGTACTCTTTGGCGGTTATACAGTTCAACGGCAGCGGAGGCACGAAAGGCGACAAGGACCTACGCGCGGGCGTGGCGCTGTGCGCACGCGCCTCGCTTCTCGGCCACATTGACGCGCTCAGAGAGCTCGGACACTGCCTCCAAGACGGTTACGGCGTTCGCCAGAACGTGGCAGAGGGAAGAAAGCTCCTCGTCCAGGCAAACGCGCGAGAGCTCGCGTTCGTGTTACGCGCGGTGGCGCGGTCTTCCTCTTCGGCGTCGTTGCTGACGTGGCGAAACACGCTGAGCAACCATTCGTCGTCGGCGGCGTCGGTTTCGGCTGCAGTGTGTCCGTTGCTTAGTGATTACGGTTACAGTGTTGCGGTTCCCGAGGTTCAACCGGCGAATTGGTTTCTGAGAGAGTGGTTTGAATCGGGTCGGGGAAGATTGGGAAACGGTTTGAGGCTTTGCGCGCACATCGGGTGCGGGCGACCCGAGACCCGGCCTCACGAATTTCGAAGGTGCTCGGTTTGCGGTAAGGTGAATTACTGCTCGAGAGGGTGTCAGGCGTTGGATTGGAAGCTGCGGCATAAGATGGAGTGTTCGCCGGCGGATATTTGGCCGGAGGAGGAGGACGGTGGTGGTGCGGTTGTTGTTGGTGGTGGCGACGGCGATGGAGTAGGAAACGACGTGGACGTGAGAAACGGCGTCGTTTGA 939 0.5751 CKRLNRLGLNRVVLSKAGPKLFAIKAKNWSESAHRFLRNCVNAGNLHASYTLGMIRFYCLENRESGLSLMAKAAMKSHAPALYSLAVIQFNGSGGTKGDKDLRAGVALCARASLLGHIDALRELGHCLQDGYGVRQNVAEGRKLLVQANARELAFVLRAVARSSSSASLLTWRNTLSNHSSSAASVSAAVCPLLSDYGYSVAVPEVQPANWFLREWFESGRGRLGNGLRLCAHIGCGRPETRPHEFRRCSVCGKVNYCSRGCQALDWKLRHKMECSPADIWPEEEDGGGAVVVGGGDGDGVGNDVDVRNGVV* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2456 312 SUPERFAMILY HCP-like 31 148 - -
Amo08g2456 312 Gene3D - 223 279 - -
Amo08g2456 312 Pfam MYND finger 236 275 IPR002893 -
Amo08g2456 312 ProSiteProfiles Zinc finger MYND-type profile. 233 275 IPR002893 -
Amo08g2456 312 PANTHER MYND DOMAIN-CONTAINING 1 290 IPR044508 -
Amo08g2456 312 SUPERFAMILY HIT/MYND zinc finger-like 229 277 - -
Amo08g2456 312 Gene3D Tetratricopeptide repeat domain 12 168 IPR011990 GO:0005515
Amo08g2456 312 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 1 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2456 Amo-Chr8 38369178 38370207 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2456 - - adu:107463542 541.962