Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2453 ATGGCGGCAGCCACTTCCAGAACCCCATTCTCCACCGTATCTCCATCTTCTTCCACTTCCTCTTCTCACTCCACCTTCCCAAACCGTGTTCTCAGATCCACGCTCCCATTTTCCTCCATTCTCACCAATAATAAGAAGCACCATTCCCTCAAAATATCAAACACCATCTCAAACAACCCTAAACCACGACCACCATCCGCTACCACCACCACCACCACCACCACCACCACACCAACCACCGCACCCTCCATCGCCACTCGTCCTCCCGCCGGCGAGCCTCGCAAGGGCGCAGATATCCTCGTGGAGGCTCTGGAGCGTGAAGGCGTAACCACCGTCTTCGCCTACCCCGGCGGCGCGTCGATGGAGATCCACCAAGCTCTGACGCGCTCCGCCGTCATCCGTAATGTCCTTCCCCGCCACGAACAAGGCGGCGCCTTCGCCGCCGAGGGTTACGCCCGCTCCTCCGGCCTCCCCGGCGTCTGCATCGCCACCTCCGGTCCCGGCGCCACCAACCTCGTCTCCGGCCTCGCCGACGCGATGATGGACTCAATCCCTATCGTTGCCGTGACCGGCCAGGTTCCCCGCCGCATGATCGGAACCGACGCATTTCAAGAAACCCCAATCGTTGAGGTAACTCGATCTATCACGAAGCATAATTACCTTGTTCTTGATGTTGATGAAATCCCTAGGATTGTTAGAGAGGCATTTTTTGTAGCTACTACTGGTAGACCTGGACCTGTTTTGATTGATGTTCCTAAAGATGTTCAGCAACAATTGGCGGTTCCCAATTGGGATTTGCCTGTTAGGGTTGCTGGTTATGTTTCTAGGATGCCAAAGATTCCAAGTTTGGCGGAATTAGAGAGCGTTGTGAGGCTAGTTTCGGAGGCGAAGAAACCGGTTTTGTATGTTGGTGGTGGTTGTTTGAATTGTAGTGAGGAATTGAGAAGGTTTGTGGAGATTACGGGTGTTCCGGTAGCGAGTACTTTGATGGGCCTTGGTGTTTACCCTGTTGGTGGTGATGATTCTCTTCAGATGTTGGGGATGCATGGAACTGTTTATGCTAATTATGCTGTTGATAAGAGTGATTTGTTGCTTGCATTTGGGGTTAGGTTTGATGATCGTGTAACCGGGAAGCTTGAGGCTTTCGCGAGTAGGGCGAAGATTGTGCACATTGATATTGATTCTGCTGAGATTGGGAAGAACAAGATCCCACACGTGTCGATTTGCGCAGATGTGAAAGTGGCATTGGAAGGGATCAATGGGATCTTGGAGGAAAAGGGGGTCAATAAAAAGAATCTTGGTCTTGAGGATTGGAGGGAAGAGCTGAGTGTGCAGAAGCAGAAGTTCCCATTGAGTTATAAGACTTTTGGTGATCTGATTTCGCCGCAGCATGCAATTCAGGTTCTTGATGAGCTCACAAATGGGGATGCAATCATTAGTACCGGTGTAGGTCAGCATCAGATGTGGGCGGCACAGTTTTACAAGTACAAGAGGCCGAGGCAGTGGTTGACATCAGGGGGTCTTGGCGCTATGGGTTTCGGCTTGCCTGCTGCAATTGGCGCAGCTGTGGCTAACCCTGGAACCGTCGTTGTTGACATCGATGGGGATGGTAGCTTCATCATGAATGTACAAGAGTTGGCAACCATAAAGGTGGAGAATCTACCGGTTAAGATTCTGTTGTTGAATAATCAGCACTTGGGTATGGTTGTTCAGTGGGAAGACAGGTTCTACAAGTCCAATAGAGCTCACACATACCTCGGCAACCCTACGAATGAGGCTGAGATCTTTCCAAACATGTTGAAGTTCGCCGACGGTTGTGGAATACCAGCAGCACGTGTGACGAAGAAGGAAGATCTTAGAGCCGCAATCAAGAAGATGCTGGACACGCCCGGCCCTTACCTTCTTGATGTGATTGTGCCTCATCAAGAGCATGTCTTGCCAATGATCCCAAGTAATGGATCCTTCAATGATGTGATTACTGAGGGTGATGGAAGAACGAAATACTAA 2007 0.5077 MAAATSRTPFSTVSPSSSTSSSHSTFPNRVLRSTLPFSSILTNNKKHHSLKISNTISNNPKPRPPSATTTTTTTTTTPTTAPSIATRPPAGEPRKGADILVEALEREGVTTVFAYPGGASMEIHQALTRSAVIRNVLPRHEQGGAFAAEGYARSSGLPGVCIATSGPGATNLVSGLADAMMDSIPIVAVTGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVLDVDEIPRIVREAFFVATTGRPGPVLIDVPKDVQQQLAVPNWDLPVRVAGYVSRMPKIPSLAELESVVRLVSEAKKPVLYVGGGCLNCSEELRRFVEITGVPVASTLMGLGVYPVGGDDSLQMLGMHGTVYANYAVDKSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKIPHVSICADVKVALEGINGILEEKGVNKKNLGLEDWREELSVQKQKFPLSYKTFGDLISPQHAIQVLDELTNGDAIISTGVGQHQMWAAQFYKYKRPRQWLTSGGLGAMGFGLPAAIGAAVANPGTVVVDIDGDGSFIMNVQELATIKVENLPVKILLLNNQHLGMVVQWEDRFYKSNRAHTYLGNPTNEAEIFPNMLKFADGCGIPAARVTKKEDLRAAIKKMLDTPGPYLLDVIVPHQEHVLPMIPSNGSFNDVITEGDGRTKY* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2453 668 PANTHER THIAMINE PYROPHOSPHATE ENZYMES 63 667 IPR045229 -
Amo08g2453 668 Pfam Thiamine pyrophosphate enzyme, central domain 287 417 IPR012000 GO:0000287|GO:0030976
Amo08g2453 668 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 91 270 IPR029061 -
Amo08g2453 668 Pfam Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 482 637 IPR011766 GO:0003824|GO:0030976
Amo08g2453 668 PANTHER ACETOLACTATE SYNTHASE 63 667 - -
Amo08g2453 668 MobiDBLite consensus disorder prediction 52 84 - -
Amo08g2453 668 Gene3D - 286 451 - -
Amo08g2453 668 MobiDBLite consensus disorder prediction 52 94 - -
Amo08g2453 668 CDD TPP_AHAS 460 651 IPR039368 GO:0030976
Amo08g2453 668 SUPERFAMILY DHS-like NAD/FAD-binding domain 283 450 IPR029035 -
Amo08g2453 668 MobiDBLite consensus disorder prediction 1 27 - -
Amo08g2453 668 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 460 660 IPR029061 -
Amo08g2453 668 TIGRFAM acolac_lg: acetolactate synthase, large subunit, biosynthetic type 95 660 IPR012846 GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660
Amo08g2453 668 Gene3D - 86 277 - -
Amo08g2453 668 ProSitePatterns Thiamine pyrophosphate enzymes signature. 519 538 IPR000399 GO:0000287|GO:0030976
Amo08g2453 668 Gene3D - 452 638 - -
Amo08g2453 668 CDD TPP_PYR_POX_like 98 253 - -
Amo08g2453 668 Pfam Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 95 258 IPR012001 GO:0030976
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2453 Amo-Chr8 38332430 38334772 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2453 K01652 - gmx:100782250 1051.97