Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2435 ATGGAGGACTCACCGTCACCGTCGACATCGACATCGACATCGACATCGAGACAGATCAAGAAGGCGGAACTTTCGGATGACGCTAACGTCACCGGGAACGGTGGAAGTTTCGGTTCGGTGAACGAGGACCTTCTCCAGAACATTCTGGCGAGGCTCCCGGCTCGTTGGTTCGCTTCCGCTGCTTGCGTCAGCAAATCATGGAGCTCTGTCTGCAATCGAATCCTTACTCGTCCAAAGCTCTCTTCTGCTCTTTCTCTCAATCCTTCACTTTCCGAAGCTGTGGATGATGTTCTTCAGAAGGTTCTATGTGAGCCGATTCGGCCTCATTTTGCCATTGTCAATGTTGGAAGTGGATTTGACTTGGAGAAGATAATGCATCTTATAAGAAAGACCTTGGGATGCAACATTCCGGTTATTGTTACTGTGTCAAATGGTATTATAGGAAGGGATGCACTCACTAGTGAATTTAAAGAGGTCAAATGGGGCGCCCTTTTTAGTGGTTTTGAGGGTGAATCTTATGCAAGAAATGTAAATGAAGGCATATTATTGACAGTTGGCTACCTTCCAGGATTAAAGGTTGAAGCTATACCATTACGGCATCCAACCCGGATATATTCATCAGTGTGTGTTGACGATTTTATAAAGGATATCAAGGAATATTCAGCCTCGGTCTCCAACTGCCCATTTCCAGTTGGGATTATATTATTTGGAGAAGCAAATGGTGACATGAATCCAGTTATGGAGAAGCTAGATTGTGCCATGCCAAGAGACACTGTTATTGTAGGTGATGAGAGGGGCTGCTTTATATACAGAAGTGGAAATGCTAAAAGGAATARAATRGGSTCCTTAGATGCTATTGCTCTTGTATTTGCTCAGGATAGAGACAGGTCTTCAGGAAATATTAAATTTCATGTTGCATTGTCAAATGGTGTTTCACCTGTGGGTACAACATACAAGGCAGCTTCAGTCAGAACAAGCAACACTGATTGTTCAACATGGTTAACTGCCAAGAGGGAAGGGCAACAACAACTTCTTGATGGTCAAAGTATTCTGGATGACATTAACAATTTGCTGGAAAATCATATTGCATCACCTGATTTGTACATTGGGGTGATTAAAAACAGAAAAGTCTCGATAGAAGGAGGGAAGCCAACACCAAGATCTTGTATTGCATATCATGGAGTTGTGGAAGGTGATGAAGAGTACCTCTACGTTGATGGAACTGGCATGAAAACAGGAGATATCTTCCAATTCTACTATTCTGATCCTAATGCCGCACAAGCTTCAGTTACTAAGGTCCATGATGCTCTGAAGAATATTAAGCTCAAGGGTGAAGGAAACAATAGTTGTGTTTTTGGGGGCCTTGTGTTTGCTTGTTATGGCCGTGGCGAATCATTCTTTGGATGTCACAATGTGGATAGCTCCCCGCTCTTAGAGTGTTTTCCAGGGCTACCAGTGGCCGGAYTATTTTGTGGCGGAGAAATCGTGCGTCCTTTTARTACTATGATTAGTCGAGAAGGAAGCCATGTTAACTGCTGTCTGCATGTTTACAGCTCTGTATATTTGGTAATGTCATATACCCCTCCATCTATGGGATGTTAG 1602 0.4313 MEDSPSPSTSTSTSTSRQIKKAELSDDANVTGNGGSFGSVNEDLLQNILARLPARWFASAACVSKSWSSVCNRILTRPKLSSALSLNPSLSEAVDDVLQKVLCEPIRPHFAIVNVGSGFDLEKIMHLIRKTLGCNIPVIVTVSNGIIGRDALTSEFKEVKWGALFSGFEGESYARNVNEGILLTVGYLPGLKVEAIPLRHPTRIYSSVCVDDFIKDIKEYSASVSNCPFPVGIILFGEANGDMNPVMEKLDCAMPRDTVIVGDERGCFIYRSGNAKRNXXGSLDAIALVFAQDRDRSSGNIKFHVALSNGVSPVGTTYKAASVRTSNTDCSTWLTAKREGQQQLLDGQSILDDINNLLENHIASPDLYIGVIKNRKVSIEGGKPTPRSCIAYHGVVEGDEEYLYVDGTGMKTGDIFQFYYSDPNAAQASVTKVHDALKNIKLKGEGNNSCVFGGLVFACYGRGESFFGCHNVDSSPLLECFPGLPVAGLFCGGEIVRPFXTMISREGSHVNCCLHVYSSVYLVMSYTPPSMGC* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2435 533 MobiDBLite consensus disorder prediction 1 19 - -
Amo08g2435 533 Pfam FIST C domain 409 496 IPR019494 -
Amo08g2435 533 SMART FIST_C_2 350 498 IPR019494 -
Amo08g2435 533 Pfam FIST N domain 119 323 IPR013702 -
Amo08g2435 533 MobiDBLite consensus disorder prediction 1 32 - -
Amo08g2435 533 SUPERFAMILY F-box domain 42 73 IPR036047 GO:0005515
Amo08g2435 533 PANTHER F-BOX ONLY PROTEIN 22 36 530 - -
Amo08g2435 533 PANTHER SKP2-LIKE, FIST C DOMAIN, FIST DOMAIN, N-TERMINAL ISOFORM 1 36 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2435 Amo-Chr8 38108018 38113488 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2435 - - gmx:100815778 722.62