Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2433 ATGCAACTTACATTAATGGTGGCATCCATCAATTTAGGGTTACAATTTCCATGTAGCTTGAGCAACAATGTGGTTAAGCTAGGGTTTCATTCTTCATCACCATCACCTAATAATAAGAGAAGAGTTTCATTAATGGTGAATGCAAATTCTAATAGAAGATTAGGAGGAACAATAAATAATGGAGAAAATAATAACATAAATAATAAAAATTATGATAAGGTGAATGGGGTGCGTGTGGCAGAGGCTCCTCTGACTTTGAGAAAATTAAAGGAAGATTCAGCAGAGGAAGCTCTTGTAACTTGCATGCATGGAAGGTTTCAGGAGGGTATTTTCGAAACTGCTCTAAATCATGTGGCAAACTCTGGAATAGGTGGGAATGGATTTGGAGCAACACGCCAGATGAGCATCCGAAAACTCATCTGGGTTGTTACTCGCATTCAAGTTCAAGTCCAGAGATATAGCAGTTGGGGGGATATAATTGAAATTGATACTTGGGTTGATGCACATGGAAAGAATGGAATGCGCAGAGATTGGGTAATCAGAGATCACTTCACTAAAGAAGTCATTGTAAAGGCTACAAGTACGTGGGTGATGATGAATAGAGAAACAAGAAAACTTTGCAAGATACCTGAAGAAGTAAGAGAAGAGCTTACACCATTCTATATTAATAGGTTTGCCATTTCTAATGAAGACACATATTCTGAAAAGATTCATAAGCTTACTGATCAAGATGCTGAGAACATCCAAACTGGATTGGCTCCAAGGTGGAACGACATGGATGCTAACCAGCATGTTAACAATGTGAAATACATTGGATGGATTTTGGAGTCCTTGCCAATGAAAGTGCTAGAAGATTATTACATGACAAGCATGACATTGGAGTTTAGGAGAGAGTGTACACAATCTAACATGTTGGAATCAATGGCGACTCCAACATCAAAGCTCATTCATGCAAACAATTCCATTAATAGAAAAGTAAACAACAATTTGCAGTTCACACACTTGCTTCGTCTTTTAGATGATGATCAAAGACCTGAAGTCGTTAGAGCCAGAACTGAATGGCATTTCAAGAACTATGCT 1080 0.3806 MQLTLMVASINLGLQFPCSLSNNVVKLGFHSSSPSPNNKRRVSLMVNANSNRRLGGTINNGENNNINNKNYDKVNGVRVAEAPLTLRKLKEDSAEEALVTCMHGRFQEGIFETALNHVANSGIGGNGFGATRQMSIRKLIWVVTRIQVQVQRYSSWGDIIEIDTWVDAHGKNGMRRDWVIRDHFTKEVIVKATSTWVMMNRETRKLCKIPEEVREELTPFYINRFAISNEDTYSEKIHKLTDQDAENIQTGLAPRWNDMDANQHVNNVKYIGWILESLPMKVLEDYYMTSMTLEFRRECTQSNMLESMATPTSKLIHANNSINRKVNNNLQFTHLLRLLDDDQRPEVVRARTEWHFKNYA 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2433 360 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 110 226 IPR029069 -
Amo08g2433 360 CDD 4HBT 132 200 - -
Amo08g2433 360 Gene3D Hotdog Thioesterase 100 358 - -
Amo08g2433 360 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 242 358 IPR029069 -
Amo08g2433 360 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 110 358 IPR045023 GO:0006633|GO:0016297
Amo08g2433 360 Pfam Acyl-ACP thioesterase 111 355 IPR002864 GO:0006633|GO:0016790
Amo08g2433 360 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 110 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2433 Amo-Chr8 38070376 38074292 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2433 112 357 Acyl Lipid Metabolism Gene Families AT1G08510 51.626 1.98e-86 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2433 K10781 - gmx:100814191 407.527