Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2421 ATGCAACTTACATCAATGGTGGCATCCATCAATTTAGGGTTACAATTTCCATGTAGCTTGAGCAACAATGTGGTTAAGCTAGGGTTTCATTCTTCATCACCATCACCTAATAATAAGAGAAGAGTTTCATTAATGGTGAATGCAAATTCTAATAGAAGATTAGGAGGAACAATAAATAATGGAGAAAATAATAACATAAATAATAAAAATTATAAGGTGAATGGGGTGCGTGTGGCAGAGGCTCCTCTGACTTTGAGAAAATTAAAGGAAGATTCAGCAGAGGAAGCTCTTGTAACTTGCATGCATGGAAGGTTTCAGGAGGGTATTTTCGAAACTGCTCTAAATCATGTGGCGAACTCTGGAATAGGTGGGATTGGATTTGGAGCAACACGCCAGATGAGCATTCGAAAACTCATCTGGGTTGTTACTCGCATTCAGGTTCAAGTCCAGAGATATAGCAGTTGGGGAGATATAATTGAAATTGATACTTGGGTTGATGCACATGGAAAGAATGGAATGCGCAGAGATTGGGTAATTAGAGATCACTTCACTAAAGAAGTCATTGTAAAAGCTACAAGTACGTGGGTGATGATGAATAGAGAAACAAGAAAACTTTGCAAGATACCTGAAGAAGTAAGGGAAGAGCTTACTCCATTTTATATTAATAGGTTTGCTATTTCTAATGAAGACACAGATTCTGAAAAGATTCACAAGCTTACTGATCAAGATGCTGAGAACATCCAAACTGGATTGGCTCCAAGGTGGAACGACATGGATGCTAACCAGCATGTGAACAATGTGAAATACATTGGATGGATTTTGGAGTCCTTGCCAATGAAAGTGCTAGAAGATTATTACATGACAAGCATGACATTGGAGTTTAGGAGAGAGTGTACACAATCTAACATGTTGGAATCAATGGCGACTCCAACATCAAAGCTCATTCATGGAAACAATTCCATCAATATAAAAGTAAACAGCAATTTGCAATTCACACACTTGCTTCGTCTTTTAGATGATGATCAAAGACCTGAAGTTGTTAGAGCCAGAACTGAATGGCATTTCAAGAACTATGCT 1077 0.3807 MQLTSMVASINLGLQFPCSLSNNVVKLGFHSSSPSPNNKRRVSLMVNANSNRRLGGTINNGENNNINNKNYKVNGVRVAEAPLTLRKLKEDSAEEALVTCMHGRFQEGIFETALNHVANSGIGGIGFGATRQMSIRKLIWVVTRIQVQVQRYSSWGDIIEIDTWVDAHGKNGMRRDWVIRDHFTKEVIVKATSTWVMMNRETRKLCKIPEEVREELTPFYINRFAISNEDTDSEKIHKLTDQDAENIQTGLAPRWNDMDANQHVNNVKYIGWILESLPMKVLEDYYMTSMTLEFRRECTQSNMLESMATPTSKLIHGNNSINIKVNSNLQFTHLLRLLDDDQRPEVVRARTEWHFKNYA 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2421 359 CDD 4HBT 125 199 - -
Amo08g2421 359 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 109 357 IPR045023 GO:0006633|GO:0016297
Amo08g2421 359 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 247 354 IPR029069 -
Amo08g2421 359 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 109 225 IPR029069 -
Amo08g2421 359 Pfam Acyl-ACP thioesterase 110 354 IPR002864 GO:0006633|GO:0016790
Amo08g2421 359 Gene3D Hotdog Thioesterase 99 357 - -
Amo08g2421 359 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 109 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2421 Amo-Chr8 37974467 37979583 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2421 111 356 Acyl Lipid Metabolism Gene Families AT1G08510 51.220 9.12e-87 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2421 K10781 - gmx:100814191 405.216