Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2327 ATGAACTTGGAATCGGTGAAGAAGTACTTGGAGAAACCAGGAGGTGACACGTCATCGCTTGTTGATGAACTCCCTCCAAGATTCTTGGAACCCTTAGTCATCAATGCACTTCGCATCGATCTCGTTGAACCGGGCCGAGTCCTCTGCTCCATGAAAATCCCTCCTCGTTTACTCAATTCCGGCAACTCGTTGCACGGCGGCGCCACCGCCACCATGGTGGATGTGGTGGGTTCAGCTGCGATTCCCACCCTAGGGCATATGTCTGGCAGGACTGGGGTTTCTGTGGAGATCAATGTTACATACTTAGATGCTGCATATGCTCATGAGGAAATTGAGATTGAGGCCAAGACCCTACGTGTAGGAAAGGCAGTAGCTGTTGTTAGTGTCGAGTTCAGGAAGAAAAAGACTGGCAAAATTTTTGCGCAGGGGCGTCATACCAAATATCTTCCGCTTGCCAGCAAGATGTGA 468 0.5 MNLESVKKYLEKPGGDTSSLVDELPPRFLEPLVINALRIDLVEPGRVLCSMKIPPRLLNSGNSLHGGATATMVDVVGSAAIPTLGHMSGRTGVSVEINVTYLDAAYAHEEIEIEAKTLRVGKAVAVVSVEFRKKKTGKIFAQGRHTKYLPLASKM* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2327 155 Pfam Thioesterase superfamily 62 138 IPR006683 -
Amo08g2327 155 Gene3D Hotdog Thioesterase 27 151 - -
Amo08g2327 155 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 36 147 IPR029069 -
Amo08g2327 155 TIGRFAM unchar_dom_1: uncharacterized domain 1 43 147 IPR003736 -
Amo08g2327 155 PANTHER THIOESTERASE SUPERFAMILY MEMBER-RELATED 1 155 IPR039298 GO:0047617
Amo08g2327 155 PANTHER F19P19.27 PROTEIN 1 155 - -
Amo08g2327 155 CDD PaaI_thioesterase 37 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2327 Amo-Chr8 36616163 36618088 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2327 K17362 - gmx:100805426 243.432