Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2245 ATGCAATCGTCCCGCAGCCACAATGAAAACGCCGCCGAACAGTCATCGGCGCCGTCGCGACCCCGCCTCACCTTCCGATCGCTCTCGGCGGTGGGATCTTCCTCTTCGTCGTCACCCTCACCGGCCTTAGGCCGCCACGTGAAGCGATCAATCTCCGCTTCCGCGAGATTTCCGCGCCAAAACAGTATGGCGCGCGAGGTGGTGCTAAACGACGTCGTTGGGAACGGGATTTCAGGAATACTGCACAAGTGGGTGAACTACGGGAGAGGGTGGCGGCCGCGGTGGTTCGAGCTACACGACGGCGTTTTGTCGTATTATAAGATTCATGGAAACGATAAGCTGGTGTTGAACGGTGAATTGGAGAATGATTCCAAGGTCATCGGAGTGGATTCCCTCCGCCGCATCAACACCCACCGACATTGCCCTTCGCGCCACCGTAAACCTGTCAGCGAAATGCATCTTATGGTGTGTTCGGTAAAAGAGAACAAGAATGACGAGAGGAGGTTCTCAATAAGCACCGGAACCAAGAAGAGGCTGCACCTTAGGGCTGAGAGCAGGGACGACCGGGAAGTTTGGGTGCAAGCCATTATGGCCGTTAAGGAAATGTACCCTCGTCTCTCCAACAAAGAGATCATGGCCCCTGTTGCCTCCGTCGCTGACTCTACTAGCAAGCTTCGCCAACGCCTTCTTCAGGAAGGCGTCAGCGAAGCTGCCATTCGAGACTGCGAGGATATTATGGGAGCAGAGGTCTTATACTTGCGGAAGCAAATTGTTGCTCTCAAACATAAGCAGTTGATGCTAATGGACACACTCCGCCATCTTGAGACAGAGAAGGTTGACCTGGAGAACACACTTGTTGACGACATAAAATCAAAGGATAATGATCCCTCCTATCATTCTTCTCATGAAAAATATAGTGATGGAAGTGTGAGTGATTCTTCAGATGAGCATGATAGACATGAAGATCAATTTGATGATGAACATAATGATGCATTCTTTGACACACAAGATTTTCTTTCTATAAGCCATGACTCTGAAGAAGAAGAACAGGATGAGGACTATGATGAAAATACTCCAAATGAAAGTGAAAAATCTTCAAGAAGACTTAGTTGTGTTGGATTGTTCAAGTATCCACAAGTGAAGAGGAGAACAAAGTTGCCAGAACCAGTTGAGAAGGAAAGTGGAGTGAGTCTATGGTCAATAATAAAAGAAAACATAGGAAAAGATCTTACAAAAGTGTGTCTTCCTGTTTACTTCAATGAACCACTCTCATCATTGCAAAAGTGTTGTGAAGATATGGAGTACTCTTACCTTCTAGACCGAGCATCTGAATGGGGTAAAATGGGTGATAGTTTGATGAGGGCACTACATGTAGCAGCATTTGCAGTTTCAGGGTATGCAAGCACCAGTGGTAGAAGTTGCAAACCTTTTAATCCATTGTTGGGTGAGACTTATGAGGCTGATTTTCCAGACAAAGGCTTTCGCTTTATCTCTGAGAAGGTCAGTCATCACCCCATGACTGTTGCATGCCATTGTGATGGCAATGGCTGGAAATTTTGGGGTGACAGCACCTTAAAAAGCAAATTCTGGGGAAGATCCATTCAGCTTGATCCTATTGGTATTTTGACTTTGGAATTTGATGATGGAGAAATCTTTCAATGGAGCAAGGTGACAACATCAATTTACAACCTTATTCTAGGAAAACTCTATTGTGATCATTATGGTACAATGAGGATAGAGGGAAACCGTGACTTTTCATGCAAGATTAAATTCAAAGAGCAATCAATCATTGATAAAAACCCTCACCAGGTGCAAGGCGTAATAGAAGATAAATATGGAGAAACAATGGCAAATATATTTGGAAAATGGGATGAGAGCTTGGTCTATGTTATTGGAGGGAATTCTAATAATAAGAAGAAAGGAGGGAAAGGCTCTAATTCTTCTAAACCCATTCTCATTTGGAAAACCAACCCACCACCTGAACACCAAACAAAATATAACCTTACACAATTTGCCATTACACTTAATGAAATCACACCTCGACTCCAGGAAAAGTTGCCACCAACAGATTCAAGACTAAGACCAGATCAAAGGTATTTAGAAAATGGAGAGCATGACATGGCCAATTCTGAGAAGTTGCGGCTGGAACAAAGACAGAGAGAGGCAAGGAAGTTGCAAGAGAGGGGTTGGAAACCAAAGTGGTTTGTTAAGGAAAATGGAAGTGAAAGTTATAGTTATAATGGTGGATATTGGGAAGCTAGGGAAATTGGAAATTGGGAATCTTGTCCTGACATTTTTGGCCAAATCTTAAATACTTCTGAGTCTAATTCCCCAACTACATGA 2343 0.4417 MQSSRSHNENAAEQSSAPSRPRLTFRSLSAVGSSSSSSPSPALGRHVKRSISASARFPRQNSMAREVVLNDVVGNGISGILHKWVNYGRGWRPRWFELHDGVLSYYKIHGNDKLVLNGELENDSKVIGVDSLRRINTHRHCPSRHRKPVSEMHLMVCSVKENKNDERRFSISTGTKKRLHLRAESRDDREVWVQAIMAVKEMYPRLSNKEIMAPVASVADSTSKLRQRLLQEGVSEAAIRDCEDIMGAEVLYLRKQIVALKHKQLMLMDTLRHLETEKVDLENTLVDDIKSKDNDPSYHSSHEKYSDGSVSDSSDEHDRHEDQFDDEHNDAFFDTQDFLSISHDSEEEEQDEDYDENTPNESEKSSRRLSCVGLFKYPQVKRRTKLPEPVEKESGVSLWSIIKENIGKDLTKVCLPVYFNEPLSSLQKCCEDMEYSYLLDRASEWGKMGDSLMRALHVAAFAVSGYASTSGRSCKPFNPLLGETYEADFPDKGFRFISEKVSHHPMTVACHCDGNGWKFWGDSTLKSKFWGRSIQLDPIGILTLEFDDGEIFQWSKVTTSIYNLILGKLYCDHYGTMRIEGNRDFSCKIKFKEQSIIDKNPHQVQGVIEDKYGETMANIFGKWDESLVYVIGGNSNNKKKGGKGSNSSKPILIWKTNPPPEHQTKYNLTQFAITLNEITPRLQEKLPPTDSRLRPDQRYLENGEHDMANSEKLRLEQRQREARKLQERGWKPKWFVKENGSESYSYNGGYWEAREIGNWESCPDIFGQILNTSESNSPTT* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2245 780 MobiDBLite consensus disorder prediction 289 322 - -
Amo08g2245 780 SUPERFAMILY Oxysterol-binding protein-like 392 773 IPR037239 -
Amo08g2245 780 Gene3D - 75 203 IPR011993 -
Amo08g2245 780 SMART PH_update 75 203 IPR001849 -
Amo08g2245 780 MobiDBLite consensus disorder prediction 1 47 - -
Amo08g2245 780 MobiDBLite consensus disorder prediction 344 367 - -
Amo08g2245 780 MobiDBLite consensus disorder prediction 1 43 - -
Amo08g2245 780 Coils Coil 708 728 - -
Amo08g2245 780 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 13 771 IPR000648 GO:0008289
Amo08g2245 780 MobiDBLite consensus disorder prediction 687 710 - -
Amo08g2245 780 Pfam Oxysterol-binding protein 397 755 IPR000648 GO:0008289
Amo08g2245 780 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C 13 771 - -
Amo08g2245 780 MobiDBLite consensus disorder prediction 683 710 - -
Amo08g2245 780 MobiDBLite consensus disorder prediction 344 358 - -
Amo08g2245 780 Pfam Pleckstrin homology domain 82 196 - -
Amo08g2245 780 ProSiteProfiles PH domain profile. 74 201 IPR001849 -
Amo08g2245 780 Gene3D - 697 761 - -
Amo08g2245 780 Gene3D - 483 651 - -
Amo08g2245 780 SUPERFAMILY PH domain-like 77 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2245 Amo-Chr8 35453195 35462105 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2245 K20456 - gmx:100781218 1073.92