Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2217 ATGCAAGAGGATCACAATAAGAAGATGAAAGTGAAGAAGGGTTGGCTTGCGGTTCAAGTTGGATTAGAAGATGAAAGTAGTGAAGAAGGTTCAACACCTCAAAGATTTGTCATACCTATTTCATACCTTTACCATCCACTATTTAAGAGACTTCTAGACAAAGCTTATGAGGTTTATGGCTATCATACCGATGGTCCACTCAAGCTACCGTGTTCCGTCGACGACTTCCTTCATCTACGGTGGCGAATCGAGAAAGAATCTAATCATCATGGTGCTGGCAGTCACCATAACCATCATAGCCACCATAATCATCGCCTTCCTCATGCTTTGTATAATTTTCACTCTTGTTAA 351 0.4103 MQEDHNKKMKVKKGWLAVQVGLEDESSEEGSTPQRFVIPISYLYHPLFKRLLDKAYEVYGYHTDGPLKLPCSVDDFLHLRWRIEKESNHHGAGSHHNHHSHHNHRLPHALYNFHSC* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2217 116 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 9 94 IPR003676 GO:0009733
Amo08g2217 116 Pfam Auxin responsive protein 7 82 IPR003676 GO:0009733
Amo08g2217 116 PANTHER SMALL AUXIN-UP RNA-RELATED 9 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2217 Amo-Chr8 35198846 35199606 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2217 11 84 Calmodulin-binding Proteins AT3G43120 45.946 5.55e-13 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2217 K14488 - gmx:100809305 169.088