Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2197 ATGGACCGAAGGAGTTGGCTATGGCGAAAGAAAAGTCCCGGCGAAACAGAGAGCTCTGGATCACAATCGCCTCATTCGGAACGATTCTCTGATGATCAGGTATATGGCACACAAATGAATCAATCAGCAGAAGTCATGTCTAAGGTTGAGCCAAATGAAGAAGAAATATCTGATGTGAAGATACTAACAGAAAGATTATCTTCTGCTCTCTTAGAGATTAGTACAAAAGAAGAATTGGTACAGCAACATGCCAAAGTTGCTGAAGAAGCTGTCTCAGGGTGGGAGAAAGCAGAAAATGAATTGTCAAGTTTGAAGAAACAACTTGATGATGCAAAGCAGAATAACTCGGTTCTTGAAGACCGAGTTAGTCACCTTGATGGAGCACTCAAGGAGTGTATGAGGCAGCTTAGACAAGCTAGAGAAGATCAAGAGAAGAAGAAGATCCATGAAGTTGCTCCGAACGGAGGGGAATCCGAGAAGTCTGAGATTGAGACTCAACTTCAGCAGAGGCTTGAGGATGTGGAGGAAGAAAATTCAACTCTTAAAGCCGAGCTTCATTCTCGACTCGAAGAACTAGAACTCAGAATAACTGAGAGGGATTTGAGTACACAAGCTGCTGAAGCAGCAAGCAAACAACACTTGGAGAGTATAAAGAAGGTAGCTAAGCTTGAAGCTGAGTGCCGAAGACTTAAGGCCATAGCTCGAAAAAACTTATCTGCCAATGATCAAAGGTCTATGACTGCTTCTTCAATCTATGTAGAGTCTTTAACAGATAGCACTTCAGATAGTGGAGAGAGACTAATGGCAGTTGAAACCGATATGCGCAAATTAGGCGCTTGGGAAACAAACGAACATGAGCCGAGCCATTCTGATTCGTGGGCTATAATTGCAGAAGTTGAGCAGTTAAAAAACTCTGCTGGAAAGAATCTTATGGTACCTTCAACTGAGATCAATTTGATGGATGATTTCCTTGAAATGGAAAGGCTAGCTGCAATGCCAGATACAGAAAGTGGAAGTGGTTTTATTGTTGTAGGACATTCGTCGAACCGGCCTAATGTTGAGCATGGTTCAATGAAATCTGGAGTGGAAGCATTGGTTCAAAAGAATGCTGAATTGGAAAAGAAGCTAGAGATGGTAGAATCACATAAGCTTGAGTTAGAGACAAGTTTAATTGAGTGCCAGAAGCAGCTCGTGGTGTCAGAGAATCGAATAAAGGAAGCAGAGTTGAAGGTAGAAGAGCTTCAAACTCAGTTAGACCTTGTGAAAAAATCACATGAAGAAGCATGTGAAGAACTAAAAGCAAGCCAAGAGAAGAATGAGATGGCTGAGTCAAAACTGAAAGTTGCTGAAACTGAGGTGCAAGAATTGATTTCAAAAATAAATTCATTGGATGAAGAGATTGAAAAGGAGAGAGCTTTATCTGCTGAGAATTTGGCCAAGTATGAAAAGTTGGTGGAAGAGATTGAAAAAGAGAGAGCTTTGTCTGCTGAGAATTTGTCCAAGTATGAGAAACTGGAGGAAGAGATTGAAAAAGAAAGAGCTTTGTCTGCTGAGAATTTGGCCAAGTATGAGAAATTGGAGGAAGAGATTGAAAAAGAAAGAGCTTTGTCTGCTGAGAATTTGTCCAAGTATGAGAAATTAGAGGAAGAGATTGAAAAGGAGAGAGCAATGTCTGAAAAAGAGAGAGCTTTGTCTATGGAGAATTTGGCTAAGTGTGAGAAGTTGGAGAAAGAGATATTGATTATGAAGTATGAAGATGGACTCAATCGAGACGCCGAGATACCGCACGGCGAAGGTGTTAGCAGTGAGATACAGTTAAGACAGGAGAAGGAGCTTGCATTGGCAGCTAGTAGATTTTCTGAGTGCAGGAAAACAATTGAATCACTTGGACAACAATTAAAGTCCCTTGCAACATTAGAAGATTTTCTTGTTGATTCAGATAAGCCTATGGACTTGGCTTGTGAAGCTGTTACACCAAATAATGGTGTTGAGAAGTTGAAATTACATAATAATAATAATAAAAACAACAAAATCAGTGATTTGAGTTTGGCCAAAAGAGATTCTGAACTATCAGTTTCAGTAATTAGTAGTCAATCTGTTAATAATGTGAAAAATCTCAGTAGTTTTGGTAGGTTCCACCCAAGAAGTAAGAGTGTCAGCAAAAGAGGAACTCATTAA 2178 0.4004 MDRRSWLWRKKSPGETESSGSQSPHSERFSDDQVYGTQMNQSAEVMSKVEPNEEEISDVKILTERLSSALLEISTKEELVQQHAKVAEEAVSGWEKAENELSSLKKQLDDAKQNNSVLEDRVSHLDGALKECMRQLRQAREDQEKKKIHEVAPNGGESEKSEIETQLQQRLEDVEEENSTLKAELHSRLEELELRITERDLSTQAAEAASKQHLESIKKVAKLEAECRRLKAIARKNLSANDQRSMTASSIYVESLTDSTSDSGERLMAVETDMRKLGAWETNEHEPSHSDSWAIIAEVEQLKNSAGKNLMVPSTEINLMDDFLEMERLAAMPDTESGSGFIVVGHSSNRPNVEHGSMKSGVEALVQKNAELEKKLEMVESHKLELETSLIECQKQLVVSENRIKEAELKVEELQTQLDLVKKSHEEACEELKASQEKNEMAESKLKVAETEVQELISKINSLDEEIEKERALSAENLAKYEKLVEEIEKERALSAENLSKYEKLEEEIEKERALSAENLAKYEKLEEEIEKERALSAENLSKYEKLEEEIEKERAMSEKERALSMENLAKCEKLEKEILIMKYEDGLNRDAEIPHGEGVSSEIQLRQEKELALAASRFSECRKTIESLGQQLKSLATLEDFLVDSDKPMDLACEAVTPNNGVEKLKLHNNNNKNNKISDLSLAKRDSELSVSVISSQSVNNVKNLSSFGRFHPRSKSVSKRGTH* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2197 725 Coils Coil 206 226 - -
Amo08g2197 725 MobiDBLite consensus disorder prediction 12 33 - -
Amo08g2197 725 Coils Coil 362 564 - -
Amo08g2197 725 PANTHER FILAMENT-LIKE PLANT PROTEIN 484 508 - -
Amo08g2197 725 PANTHER FILAMENT-LIKE PLANT PROTEIN 501 530 - -
Amo08g2197 725 PANTHER FILAMENT-LIKE PLANT PROTEIN 559 682 - -
Amo08g2197 725 PANTHER FILAMENT-LIKE PLANT PROTEIN 526 551 - -
Amo08g2197 725 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 501 530 - -
Amo08g2197 725 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 526 551 - -
Amo08g2197 725 PANTHER FILAMENT-LIKE PLANT PROTEIN 1 488 - -
Amo08g2197 725 MobiDBLite consensus disorder prediction 1 33 - -
Amo08g2197 725 Coils Coil 94 121 - -
Amo08g2197 725 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 488 - -
Amo08g2197 725 MobiDBLite consensus disorder prediction 138 179 - -
Amo08g2197 725 Coils Coil 164 191 - -
Amo08g2197 725 Pfam Filament-like plant protein, long coiled-coil 165 238 IPR008587 -
Amo08g2197 725 Pfam Filament-like plant protein, long coiled-coil 76 154 IPR008587 -
Amo08g2197 725 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 484 508 - -
Amo08g2197 725 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 559 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2197 Amo-Chr8 34924514 34927455 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2197 - - aip:107613274 1301.96