LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo08g2190	GGAACGAAGAAGTTATTATTACCAGGATTATTATTGTTGGTTTTCTTGTTATGTTGTTCAACTTGTTCAGCTTGGTTTGGTAGTAGTAGTAGTAGTAATAGTAATAAGCATAAAAGTATTAGTTCCAATTATGGAAATGGAAGAAGAAACTCTATTCCTCTTGATGAACCTTCCTCTTCCTCTTCCTCTTCCTCCTCGTCTTCATGGTTATCATCGTCGTTGCTTAATCAGTATCGAGCTAGCTCATCCGTCGTGTTTCGAGTTCACGGCAACGTTTATCCGGTTGGGTTCTATAATGTTACATTGAACATAGGGCACCCACCAAGGCCTTATTACCTTGACATTGATACAGGCAGCGACCTCACATGGCTTCAATGTGATGCCCCTTGTACTCATTGCACTCAGACGCCGCATCCGTTGTACCGGCCGAGCAATGACTTGGTGGCATGTAGGGATCCAATGTGTGCATCATTGCATCAGAATGAAGCATATGAATGTGAACAGCCACACCAATGTGACTATGAAGTTGAGTATGCAGATCATTACTCTTCCCTTGGTGTTCTTGTGAATGATGTGTACCTTCTGAACTTCACAAATGGAATCCAACTGAGAGTTAGAATGGCACTTGGATGTGGATATGATCAGCTATTTCAAGAGCATTCATACCATCCATTGGATGGAATGCTTGGTCTTGGAAGGGGAAGATCAAGCTTGGTTTCACAGCTTAATAGTCAGGGTTTGGTTAGAAATGTAGTTGGACACTGCTTGAGTTCACAAGGGGGAGGCTATATCTATTTTGGTCATGTTTTTGACTCTTCTAGACTCACTTGGACTCCTATGACATCCACACATTTCAAACATTACTCAGCTGGGCCAGCTGAACTCCTTTTGGGAGGAAAGAGAACTGGGATTGGAAATCTCCATGGTGTTTTTGACACTGGCAGTTCTTACACTTACTTCAACTCCATGGCTTACCAAGCAGCAATTTCTTGGGTCAGTTGA	1002	0.4251	GTKKLLLPGLLLLVFLLCCSTCSAWFGSSSSSNSNKHKSISSNYGNGRRNSIPLDEPSSSSSSSSSSSWLSSSLLNQYRASSSVVFRVHGNVYPVGFYNVTLNIGHPPRPYYLDIDTGSDLTWLQCDAPCTHCTQTPHPLYRPSNDLVACRDPMCASLHQNEAYECEQPHQCDYEVEYADHYSSLGVLVNDVYLLNFTNGIQLRVRMALGCGYDQLFQEHSYHPLDGMLGLGRGRSSLVSQLNSQGLVRNVVGHCLSSQGGGYIYFGHVFDSSRLTWTPMTSTHFKHYSAGPAELLLGGKRTGIGNLHGVFDTGSSYTYFNSMAYQAAISWVS*	334

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo08g2190	333	MobiDBLite	consensus disorder prediction	27	66	-	-
	Amo08g2190	333	PANTHER	EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN	12	332	-	-
	Amo08g2190	333	SUPERFAMILY	Acid proteases	90	330	IPR021109	-
	Amo08g2190	333	Pfam	Xylanase inhibitor N-terminal	98	268	IPR032861	-
	Amo08g2190	333	PANTHER	ASPARTYL PROTEASES	12	332	IPR001461	GO:0004190\|GO:0006508
	Amo08g2190	333	ProSiteProfiles	Peptidase family A1 domain profile.	98	333	IPR033121	-
	Amo08g2190	333	Gene3D	Acid Proteases	72	268	IPR021109	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo08g2190	Amo-Chr8	34862070	34866994	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo08g2190	71	332	Miscellaneous Gene Families	AT1G44130	50.187	4.22e-89	271

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo08g2190	-		-	adu:107463231	628.632