Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2181 ATGGGGTCTGAATTCACAGGAGACACAACTATGGATGCAGCAGAGAAGAGGCTCAATGAGCTTGGTTACAAGCAAGAACTTAGAAGAGAAATGACTATGTTCAAAACACTAGCAATATCATTTTCAACAATGACCCTATTCACAGGAATCACTCCTCTATATGGTTCCAGCCTTCAATATGCAGGACCTGCATCTCTTGTATGGGGATGGGTGGTGGTTTCTTTCTTCACTTGGTTTGTTGGGATTGCAATGGCTGAGATTTGTTCATCTTTCCCGACAACTGGCTCTTTGTACTTTTGGGCTGCGCATTTAGCCGGTCCGAAATGGGGACCATTTTCTTCATGGTGCTGTGCTTGGCTTGAGACCATAGGACTTATTGCTGGGATTGGAACTCAGGCATATGCAGGATCACAAACATTGCAGAGTATAATCTTACTCTCAACAGGAACAMATAAAGGTGGAGGGTACTTTGCTCCAAAATGGTTATTCTTGTGTATGTATATTGGCTTAACTGTCATATGGGCAGCTCTCAACACATTTGCATTGGAAGTGATTGCCTTGATAGATATGATTTCAATATGGTGGCAGCTTATTGGGGGAATAGTGATTGTGATAATGCTACCTCTGGTATCACTTAGTACACAATCTGCTTCATATGTATTCACACACTTGGAGTTGGCACCTGAATCAACTGGAATTACAAGCAAACCATATGCTGTGATTCTTGCATTTCTTGTGAGCCAGTATTCCCTCTTTGGATATGATGCTGCCGCGCATTTAACTGAAGAAACCAAAGGTGCTGACAAGAATGGACCTATTGCCATACTTGGCAGCATTGGCATGATTTCAGTCTTTGGTTGGGCTTATATTCTTGCACTTACATTCAGCATTCAGAATTTCAGTTACCTTTATGATACAAACAATGAGACTGCTGGAGCATTTGTGCCAGCACAAATACTCTATGATGCATTCCATGGAAGATATCACAATTCTATTGGTGCAATCATTCTACTATTTATCATTTGGGGTTCATTCTTTTTTGGTGGACTTTCAATCACTACAAGTGCTGCTAGAGTTGTTTATGCTCTGTCTAGAGATAATGGAGTTCCATTTTCGTCCTTATGGCGAAAACTACACCCAAAGCGCAAGGTTCCCTCGAACGCCGTATGGCTCTGTGCAGGAATCTGCATCCTTCTTGGCCTCCCAATCCTAAAGGTCAATGTAGTCTTCACTGCCATAACTTCAATATGCACAATCGGATGGGTTGGTGGCTATGCAGTTCCAATATTTGCAAGAATGGTTATGCCTGAAAAGAACTTCAAGCCTGGACCCTTTTACTTAGGAAAAGCTGGAAGACCAATTTGCTTGATTGCATTTCTGTGGATTTGTTACACTTGTTCTGTGTTCCTTTTGCCAACATTGTACCCTATAACTTGGAATACTTTCAATTATGCACCAGTTGCTTTGGGTGTAGTTTTAGGCCTTATAATGCTTTGGTGGGTTGTAGATGCAAGAAAATGGTTTAAGGGACCAGTTAGGAACATTGATACGCAAAATGGTAAGGTTTAA 1569 0.4143 MGSEFTGDTTMDAAEKRLNELGYKQELRREMTMFKTLAISFSTMTLFTGITPLYGSSLQYAGPASLVWGWVVVSFFTWFVGIAMAEICSSFPTTGSLYFWAAHLAGPKWGPFSSWCCAWLETIGLIAGIGTQAYAGSQTLQSIILLSTGTXKGGGYFAPKWLFLCMYIGLTVIWAALNTFALEVIALIDMISIWWQLIGGIVIVIMLPLVSLSTQSASYVFTHLELAPESTGITSKPYAVILAFLVSQYSLFGYDAAAHLTEETKGADKNGPIAILGSIGMISVFGWAYILALTFSIQNFSYLYDTNNETAGAFVPAQILYDAFHGRYHNSIGAIILLFIIWGSFFFGGLSITTSAARVVYALSRDNGVPFSSLWRKLHPKRKVPSNAVWLCAGICILLGLPILKVNVVFTAITSICTIGWVGGYAVPIFARMVMPEKNFKPGPFYLGKAGRPICLIAFLWICYTCSVFLLPTLYPITWNTFNYAPVALGVVLGLIMLWWVVDARKWFKGPVRNIDTQNGKV* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2181 522 PANTHER OSJNBB0086G13.12 PROTEIN 8 522 - -
Amo08g2181 522 PIRSF AA_transporter 11 521 - -
Amo08g2181 522 PANTHER AMINO-ACID PERMEASE BAT1 8 522 - -
Amo08g2181 522 ProSitePatterns Amino acid permeases signature. 61 92 IPR004840 GO:0006865|GO:0016021|GO:0055085
Amo08g2181 522 Pfam Amino acid permease 33 491 IPR002293 GO:0016020|GO:0022857|GO:0055085
Amo08g2181 522 Gene3D Amino acid/polyamine transporter I 26 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2181 Amo-Chr8 34747117 34751374 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2181 80 515 Organic Solute Cotransporters AT2G01170 42.105 4.20e-108 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2181 - - gmx:100815443 997.653