Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2176 ATGGCTTTGAAAACTTGCTTCACTCTTCTCCACCATTCACAACACTCTTCTTCCAGAACCTTCTTCTCATTCCCCTCTTTCAATTCTGCTTCCTGCATTCTTCACAATGAACCTCACAACAACCACATCCTGCATTTCCCAACATTTTTTACTAAGAGGAAGCTCAATCTTGCTCTTCTTCTCACAACTTTTCTTTCGAGCAATTTATCAAACACTAGTGGTGCATTGTTGATGGCTCAAGAGTTGGACTTGGAGCTTCAGAGATACACTGATTCCAAGGAAGGTTTCACTCTTCTTATACCCTCTTCTTGGACTAAGGTTGATAAAGCTGGGGCAACTGCTTTGTTTCAAGATGCAAGTATGGGGAGCAACAACATTGGGGTTGTTGTGAACCCAGTTCGTCTTGMAAATCTTGGAGACTTCGGGAGCCCCGAGTTTGTTGCTGATAAGCTTTTACAAGCAGAAAGGCGTAAGGAAAGTACAAAGGAAGCTAAATTAATTGCAGCTTCAGAAAGATCAGGAAATGGAGATTTGCAAATTTATGAATTTGAATACACCATTGATAGTACTCGTGGAGGAAAGAAGAGGATATTTTCTGCAGCATTTGTGACCTCAAAGAAACTCTATCTTCTTAACATTGTTCATTCTGATAAACCAGAGAGTCCTCTTGAACCATATAAAAGAATGATTTTAGAGCAAGTTCTCCATTCCTTTAATGCAGCAGCTTAA 729 0.3992 MALKTCFTLLHHSQHSSSRTFFSFPSFNSASCILHNEPHNNHILHFPTFFTKRKLNLALLLTTFLSSNLSNTSGALLMAQELDLELQRYTDSKEGFTLLIPSSWTKVDKAGATALFQDASMGSNNIGVVVNPVRLXNLGDFGSPEFVADKLLQAERRKESTKEAKLIAASERSGNGDLQIYEFEYTIDSTRGGKKRIFSAAFVTSKKLYLLNIVHSDKPESPLEPYKRMILEQVLHSFNAAA* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2176 242 PANTHER - 28 241 - -
Amo08g2176 242 Pfam PsbP 86 239 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Amo08g2176 242 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 77 239 - -
Amo08g2176 242 SUPERFAMILY Mog1p/PsbP-like 86 240 IPR016123 -
Amo08g2176 242 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 2, CHLOROPLASTIC 28 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2176 Amo-Chr8 34701456 34703296 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2176 - - aip:107641317 411.379