Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2160 ATGGAGATATTTTTCCAGAGAACTAACAGGGCTGGTGGTGATGAGCTGCATGCAACAGGTGAAGTTGTTCGGCGATGTGGACTTTGCCAAGAATCAGATATGGTGCTAAGGAAAAATCGAGATGGCAATTTTATGGTTGGATGTCTGGGTTACCCTCAGTGCAGGAATGCTGTCTGGCTTCCCGGACCAGTATTAGAAGCAGATGTTACTGCCAATGCTTGCAACACCTGCACCCCTGGTCCAGTTTACCTGATTAAATTCAAGTTTCGGCGGCTGGAAATACCACCAAACTACAGTGCGGACCATTTGGGTTGCATAGGTGGCTGTGATCAGATTCTTGCGGAGTTGACAGAAATATGTGGCACTGGCTCTCGCACAGGAAGAGCTCGTGGACCAGCTGCACAAACCAACAATGCCCGCCAAAGTAACACAAGACAGGTTGTTTGTATGAACTGCCAAGAAACAGGACATTCTTCTAATGATTGTCCTTCACAAAGGAATGCCCGGCATCGTGGAACAAACCAACAAAATGGGGAAGCCACTGTTTCATGCAGTTCCTGTGGGATGCCATGTGTTTTGAGAACTGCAAATACAGAAAATAACAGGGGAAGAAAGTTCTACAAATGTCAATCACAGGAGTGTAACTTTTTTGCGTGGGAGGATAGCCTCAATACTGGCACTGGAGGAAGAAATTTTACACGTCCGAGTAGTATTCCACAAGCCAACCGTGGGAGAAATGGTGGCCGTGGATCTCGCGGTAGAGGTAGACACAATGGATCTCATGCTGCTAACACAACTTTTGTGTCAGCCACTGGTGACCCTGTTAGTGGTAGAAGATGCTTTGTGTGTGGTGATCCATCTCACTTTGCTAATGTGTGCCCTAACCGTGGTGGCTAA 897 0.4716 MEIFFQRTNRAGGDELHATGEVVRRCGLCQESDMVLRKNRDGNFMVGCLGYPQCRNAVWLPGPVLEADVTANACNTCTPGPVYLIKFKFRRLEIPPNYSADHLGCIGGCDQILAELTEICGTGSRTGRARGPAAQTNNARQSNTRQVVCMNCQETGHSSNDCPSQRNARHRGTNQQNGEATVSCSSCGMPCVLRTANTENNRGRKFYKCQSQECNFFAWEDSLNTGTGGRNFTRPSSIPQANRGRNGGRGSRGRGRHNGSHAANTTFVSATGDPVSGRRCFVCGDPSHFANVCPNRGG* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2160 298 PANTHER OS07G0190500 PROTEIN 132 224 - -
Amo08g2160 298 MobiDBLite consensus disorder prediction 227 244 - -
Amo08g2160 298 SMART c2hcfinal6 148 164 IPR001878 GO:0003676|GO:0008270
Amo08g2160 298 SMART c2hcfinal6 279 295 IPR001878 GO:0003676|GO:0008270
Amo08g2160 298 Pfam GRF zinc finger 183 222 IPR010666 GO:0008270
Amo08g2160 298 SUPERFAMILY Retrovirus zinc finger-like domains 132 170 IPR036875 GO:0003676|GO:0008270
Amo08g2160 298 Pfam Zinc knuckle 148 164 IPR001878 GO:0003676|GO:0008270
Amo08g2160 298 ProSiteProfiles Zinc finger CCHC-type profile. 149 164 IPR001878 GO:0003676|GO:0008270
Amo08g2160 298 MobiDBLite consensus disorder prediction 227 270 - -
Amo08g2160 298 SUPERFAMILY Retrovirus zinc finger-like domains 271 296 IPR036875 GO:0003676|GO:0008270
Amo08g2160 298 MobiDBLite consensus disorder prediction 156 181 - -
Amo08g2160 298 ProSiteProfiles Zinc finger CCHC-type profile. 278 295 IPR001878 GO:0003676|GO:0008270
Amo08g2160 298 Pfam Topoisomerase DNA binding C4 zinc finger 24 61 IPR013498 GO:0003677|GO:0003916|GO:0005694|GO:0006265
Amo08g2160 298 Gene3D Bacterial Topoisomerase I, domain 1 15 60 - -
Amo08g2160 298 Gene3D - 138 176 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2160 K03165 - gmx:100818971 471.085