Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2153 ATGATGTTCAAGGTAGCGAATGCATCGGAATACCTGGTAATAACAGGTGCTGGGATCAAAGACGTGAAGCTTGCGAAGAAAGCATGGGTGTTTCCATGGCAATCATGCACCACCTTGGACCTTTCTCCGGTAAACTACACGTTCGAGCTCCAAGCCATGAGCGCCGAGAAGCTCCCTTTCAAGCTTCCTTCGGTGTTCACAATTGGTCCACGTGTCGACGATCACGAGTCTCTCTTAAAGTACGCCAAGCTCCTGTCGACCCATGATAAGCTCTCCAACCACGTTAATGATCTCGTCCAAGGAGTCATTGAGGGTGAGACGCGTGTTCTCGCCGCCTCTATGACTATGGACGAGATCTTCAAAGGAACCAAGGAGTTCAAGCAAGGTGTGTTCGAGAAAGTTCAGCTAGAACTGAATCAGTTTGGGCTGCTGATCTACAATGCGAACGTGAAGCAGCTGGTGGATGTGCCGGGACATGAGTACTTCTCTTACTTGGGCAAGAAGACTCAGATGGAGGCTGCAAATCAGGCCAAGGTGGACGTTGCTGAAGCCAAGAAGAAGGGAGAGGTTGGTGCCAAGCTTAGGGAAGGCGAGACGCTCCAGAATGCGGCCAAGATCGACGCTGAGACGAAGATCATTGCCACTCAGAAGAAAGGCGAGGGCGATAAGGAGGAGATCAACGTGAGGACATCAGTGAAGGTGTTTGAGAATTCTAAGGAAGCAGAGGTGGCAGAGGCAAATGCAGAGCTAGCAAGGAAGAAGGCGGAGTGGTCGAAGGTGGCAAAGTTGGCGGAGATGGAGGCTACAAAGGCAGTGTCTTTGAGGGAGGCAGAGCTGCAGGGGGAGGTTGAGAGGATGAATGCTAAGGCCAGGACTGAGAAACTTAGAGCTGATTACCTTACCCAGGCAAGCGTTGAGTATGAGACCAAGGCACAAGAGGCCAACTGGGAAACTATTACAAGAAACAAAAAGAAGCAAAGCAGTTCTTTTCCAGAAGGAGAAAGAAGCTGA 1011 0.5054 MMFKVANASEYLVITGAGIKDVKLAKKAWVFPWQSCTTLDLSPVNYTFELQAMSAEKLPFKLPSVFTIGPRVDDHESLLKYAKLLSTHDKLSNHVNDLVQGVIEGETRVLAASMTMDEIFKGTKEFKQGVFEKVQLELNQFGLLIYNANVKQLVDVPGHEYFSYLGKKTQMEAANQAKVDVAEAKKKGEVGAKLREGETLQNAAKIDAETKIIATQKKGEGDKEEINVRTSVKVFENSKEAEVAEANAELARKKAEWSKVAKLAEMEATKAVSLREAELQGEVERMNAKARTEKLRADYLTQASVEYETKAQEANWETITRNKKKQSSSFPEGERS* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2153 336 Coils Coil 236 256 - -
Amo08g2153 336 SUPERFAMILY Band 7/SPFH domain 32 173 IPR036013 -
Amo08g2153 336 CDD SPFH_flotillin 29 176 - -
Amo08g2153 336 Pfam SPFH domain / Band 7 family 7 185 IPR001107 -
Amo08g2153 336 PANTHER FLOTILLIN-RELATED 1 327 IPR027705 -
Amo08g2153 336 Gene3D Band 7 domain 38 156 IPR036013 -
Amo08g2153 336 MobiDBLite consensus disorder prediction 310 336 - -
Amo08g2153 336 MobiDBLite consensus disorder prediction 310 326 - -
Amo08g2153 336 PANTHER BNAC03G49410D PROTEIN 1 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2153 Amo-Chr8 34431762 34436976 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2153 K07192 - pop:7458395 502.671