Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2141 ATGCAACCCAAATCGCCTTTGCTCCTGCTTCTTCTTCTCTCTCTTCAATTATTCATCTGCTTCGCATTCGCTCAATCTACCACCGGGTCCGCTGAAGGTTACACCATTTATGGTCGAGTGAAGATCCCCAGCAATTTAGGAACAAAAGACTATATAATTCCCGGAAAAGTGTCGAATGTCAAAGTCATACTCAATGGTGGTCAGAGAGTTACTTTTTTGAGGCCTGATGGATATTTCTCATTCCACAACGTCCCTGCAGGGACTCATCTAATTGAAGTGGCTGCACTCGGCTATTTCTTCTCTCCGGTACGAGTTGATGTCAGCGCCAGAAACCCCGGCAAAATACAGGCAGCATTGACGGAAAGTAGGAGGGGGCTCACTGAGTTTGTATTAGAGCCATTGAAGGAGGAACAATATTATGAGATTAGGGAACCATTCTCTATTATGTCCATTGTGAAAAGTCCAATGGGTCTGATGGTGGGATTTATGCTCATTGTTGTCTTCCTCATGCCCAAATTAATGGAGAACATGGATCCAGAAGAAATGAGACGTGCACAAGAAGAAATGAGAAATCAAGGAGTTCCATCTTTGGCAAGCATGTTACCTGGTGCTGCAAGAAGCAATTAG 627 0.4418 MQPKSPLLLLLLLSLQLFICFAFAQSTTGSAEGYTIYGRVKIPSNLGTKDYIIPGKVSNVKVILNGGQRVTFLRPDGYFSFHNVPAGTHLIEVAALGYFFSPVRVDVSARNPGKIQAALTESRRGLTEFVLEPLKEEQYYEIREPFSIMSIVKSPMGLMVGFMLIVVFLMPKLMENMDPEEMRRAQEEMRNQGVPSLASMLPGAARSN* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2141 208 PANTHER ER MEMBRANE PROTEIN COMPLEX SUBUNIT 7 HOMOLOG 20 208 - -
Amo08g2141 208 Pfam ER membrane protein complex subunit 7, beta-sandwich domain 57 159 IPR019008 -
Amo08g2141 208 SUPERFAMILY Starch-binding domain-like 31 112 IPR013784 GO:0030246
Amo08g2141 208 PANTHER UNCHARACTERIZED 20 208 IPR039163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2141 Amo-Chr8 34287165 34289816 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2141 K23568 - gmx:100816780 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g2141 08 34287165 34289816 Amo18g3463 18 137761772 137764326 hybridization