Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2094 ATGGATTCTGAAGGAAGTGAAAAGGAGACCGTGGTTACTCAGGTTAGCATTGGTGGATTTGACCGTGAGGTCAGAGCAAATGATCTTGTGGTATTCTTGGAAGAGAAAATTGGAATGGTAGATAGGTGTCGCTTGAAAACATCTTGGACCCCTCCAGAGTCATATCCAGATTTCAGCATCATTGATACTACACGGGTTAAAAAAACTGATGCCTATCAGAAGGTGGAGCCCCATGCCTTTGTGCATTTCGCAATGTCGGAATATGTAGCTGAGGCTCTTAGTGCTGCAGGTCGAGGTGATCTAGTTTTGAATAACTCGCCATTGAAAGTTAGTTGTGGTCCTGAAAATCCACACTTCTTAAGGCAGAGGAGGAGAAAGACAACTCCTTTTAAGATGTGTGATGTACTTGTTGAAATTGGTACTTTAGTTAAACCTGAGGAATTTGTAGTCGCTTGGAGAGGACCTAACAAAGGGGTAAACTTTCTAGTGGATCCTTTTGATAGCATGTGCAAAGTTTGTTTCAATAAGGACGTTGTATTTGCATTCAAAGGAAAAGAAACAAAAGCAGTCATAAAGTGTGATTTTCAGGTGGGATTCTTGGTGAGAGACATAAATGAGATAAAGCAATATAAGGATATGTCATCTTTTGTTGTTTTATTGCACCTTGCTTCAGCTCCTTGGGTTTGGTATAGAACTGCAGATGATGACATTGTAGAATCTCCAATTGATTTGCTTGATGACGATGATCCGTGGGCTAGGACCACTGATTTTACACCAAGTGGGGCCATTGGTCGATGCAATTTTTATAGAATTTCAATACCACCACGCCACGGTGCAAAATTGGTTAAGGCCATGCATTACTTGAGAGCTCAAAGAGTGCAAGATATTTCACTTAGGCGACCACCTAGGGTACTGGATGAACTAGATTTTGGTGTGTCCATGTCAGATCCTTTCTTCTGCATTCATTCACAGAAAGGTGTTGCTTTTGATGTTATATTCTTGGTTAATGCTGTCTTGCACAAAGGTATAATCAATCAACACAGTTTGTCAGACGAGTTTTTTGAATTGCTGAGAAATCAACCTAAGGAGGTCAATGTGGCTGCCCTGAAACACTTATGTTCATACAAGCGTCCAGTGTTTGATGCAGCTAAGAGGCTGAAACAAGTCCAAGAATGGTTGCTCAGAAATCCAAAACTTTATCAGAACTCGAAACAGTTAGATGATGTTGTTGAGGTTAGAAGACTGGTCATCACTCCAACTAAAGCCTACTGTATACCACCAGAGGTTGAACTGTCCAACAGGGTTCTTAGAAACTACAAAGAACTTTCAGATCGTTTCTTAAGGGTCACCTTTATGGATGAAGGCATGCAAACAATCAATGCGAATGCTCTTAACTATTATGTTGCTCCCATAGTGAAGGAAATCACTTCAAACTCCTTTCCGCAGAAGACACTAATATATAGGAGGGTGAAGAATATCTTGGAAGAGGGGTTTCATTTATGTGGCCGAAAGTATTCATTTTTGGCCTTCTCTTCCAATCAACTGCGGGATCGTTCTGCTTGGTTTTTTGCTAATGCAAGCAACGAAACTTGTGATACCATAAGAAATTGGATGGGAAAGTTCAAAATACACAATATTGCAAAATGTGCTGCTCGGATGGGACAGTGTTTTTCATCCACTTATGCAACAGTTCAAGTTGCAGATGGTGAGGTTAACTATCGTTTGCCTGATATTGTAAGGAATAACTATGTTTTCTCCGATGGCATCGGTATTATTACTACTGATCTGGCAGGGGAAGTTGCTGAAAAGTTGAAATTGGACAGTGTGCCCTCTGCATATCAGATCAGATTTGCTGGTTTTAAAGGGGTAGTAGCCTCTTGGCCTGCCAAAGGGGATGAGCATCGGCTCTCTTTAAGGCCTAGTATGGACAAGTTTTCTTCTAATCATAAGACCTTGGAGATTTGTGCCTGGACTAGGTTTCAGCCTGGATTTCTGAATAGGCAGATTATAACATTGCTTTCAGCATTGGATGTATCAGATGAAATATTTTGGCAAATGCAGGAGGCAATGATTTCAAGGTTAAATGAAATGCTTGTGGATGCCAATGTGGCATTTGAAGTTCTTACGAAATCCTGTGCTGAGCATGGAAATGCTGCAGCAATAATGTTAAGTTGTGGTTTCAACCCCCAAAATGAACCTCACCTTAGAGGTATGTTGACTTCCACACGTGCTGCACAGTTATGGGGACTCAGAGAAAAGTCTAGGATTTTTGTATCTTCTGGCCGGTGGTTGATGGGTGTATTAGATGAGTTGGCTGTGCTTGAACAAGGGCAATGCTTTGTTCAAGTGTCTACTCCCTCACTTGAGAATTGTTTCTCAAAGCATGGGTCAAGATTTTCAGAGACAAAGAACCTTCACATAGTGAAAGGTTTGGTGGTTATAGCAAAAAATCCTTGTCTTCACCCAGGTGATGTAAGAGTTTTGGAGGCAGTTGATGCTCCTGAATTGCATCATTTACATGATTGTCTTGTGTTCCCTCAAAAAGGGGACAGACCTCATACAAATGAGGCTTCTGGAAGTGATCTTGATGGGGATCTTTATTTTGCCACATGGGATGAAAATCTTATTCCACCTAGTAAGAGTAGCTGGATACCTATGGATTATACTGCACAAGAAAGCCAACGTACCAACCGTCAAGTCACTACTCGGGACATTGTAGATTTTTTTGTCAGAAACATGGTCAATGAGCATTTGGGTACCATATGCAATGCACATGTTGTACATGCCGATTGCAGCGAGTATGGTGCCTTGGACGAGAAATGCATAAAACTGGCTGAGTTAGCAGCAACTGCGGTTGATTTTCCAAAGACTGGGAAGATTGTTGCGATGCCACCTCAATTGAAACCAAAATTGTACCCTGATTTTATGGGCAAGGAGCCGCACCAATCCTATAAATCCACAAAAATCCTTGGCAGACTTTACAGGAGTATCAAAGATGCCTATGATAAAGAAATCGATGCACCTGATTTGAACTATCCAACAGATGACATACCTTACGATACAGATCTTGAGGTTCCAGGATCTGCTGATTTTATTGCTGATGCATGGGAAAAGAAGTGCTCTTATGATGGTCAATTGAGTGGACTTCTTGGTCAATATAAAGTGAAAAGAGAAGAGGAGGTTGTCACTGGGCAGATCTGGTCTATGCCAAAATACAACAGTAGGAAGCAAGGGGAGCTGAAGGAGAGACTCAAGCACTCATATAGTGCCCTGAAAAAAGAATTCCGGAACATGTTCGAGAAATTGAATTTGAATCCAGATGCAGGAGAATTAAGTGACGAAGAAAAGAATCTGTTGTATGAAAAGAAAGCTTCGGCGTGGTATCAGGTGACATATCATCCTGAGTGGGTAAAGAAGTCCCTTGAACTGCAATTCAAGTCCCGAGAGAGCCAGGAGCCAGGTAGTTTGGGGAATGTGGTGATGCTGAGTTTCCCCTGGATTGCTGTTGATTACCTTGCTCGCATGAAGATAAGGCATCGAAACTCTGGAAACTTCGACTCCACTAGGCCAGTTGATTCCCTGGCAAAGTACCTATCCGAAAGGTTATAG 3609 0.4173 MDSEGSEKETVVTQVSIGGFDREVRANDLVVFLEEKIGMVDRCRLKTSWTPPESYPDFSIIDTTRVKKTDAYQKVEPHAFVHFAMSEYVAEALSAAGRGDLVLNNSPLKVSCGPENPHFLRQRRRKTTPFKMCDVLVEIGTLVKPEEFVVAWRGPNKGVNFLVDPFDSMCKVCFNKDVVFAFKGKETKAVIKCDFQVGFLVRDINEIKQYKDMSSFVVLLHLASAPWVWYRTADDDIVESPIDLLDDDDPWARTTDFTPSGAIGRCNFYRISIPPRHGAKLVKAMHYLRAQRVQDISLRRPPRVLDELDFGVSMSDPFFCIHSQKGVAFDVIFLVNAVLHKGIINQHSLSDEFFELLRNQPKEVNVAALKHLCSYKRPVFDAAKRLKQVQEWLLRNPKLYQNSKQLDDVVEVRRLVITPTKAYCIPPEVELSNRVLRNYKELSDRFLRVTFMDEGMQTINANALNYYVAPIVKEITSNSFPQKTLIYRRVKNILEEGFHLCGRKYSFLAFSSNQLRDRSAWFFANASNETCDTIRNWMGKFKIHNIAKCAARMGQCFSSTYATVQVADGEVNYRLPDIVRNNYVFSDGIGIITTDLAGEVAEKLKLDSVPSAYQIRFAGFKGVVASWPAKGDEHRLSLRPSMDKFSSNHKTLEICAWTRFQPGFLNRQIITLLSALDVSDEIFWQMQEAMISRLNEMLVDANVAFEVLTKSCAEHGNAAAIMLSCGFNPQNEPHLRGMLTSTRAAQLWGLREKSRIFVSSGRWLMGVLDELAVLEQGQCFVQVSTPSLENCFSKHGSRFSETKNLHIVKGLVVIAKNPCLHPGDVRVLEAVDAPELHHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFATWDENLIPPSKSSWIPMDYTAQESQRTNRQVTTRDIVDFFVRNMVNEHLGTICNAHVVHADCSEYGALDEKCIKLAELAATAVDFPKTGKIVAMPPQLKPKLYPDFMGKEPHQSYKSTKILGRLYRSIKDAYDKEIDAPDLNYPTDDIPYDTDLEVPGSADFIADAWEKKCSYDGQLSGLLGQYKVKREEEVVTGQIWSMPKYNSRKQGELKERLKHSYSALKKEFRNMFEKLNLNPDAGELSDEEKNLLYEKKASAWYQVTYHPEWVKKSLELQFKSRESQEPGSLGNVVMLSFPWIAVDYLARMKIRHRNSGNFDSTRPVDSLAKYLSERL* 1203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2094 1202 PANTHER RNA-DEPENDENT RNA POLYMERASE 7 1201 IPR007855 GO:0003968
Amo08g2094 1202 PANTHER RNA-DEPENDENT RNA POLYMERASE 6 7 1201 - -
Amo08g2094 1202 Pfam RNA dependent RNA polymerase 417 997 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2094 Amo-Chr8 33733772 33741713 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2094 K11699 - gmx:100795178 2013.81