Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2006 ATGGGTTCGAGAAACACCTCTGTTCTGTGCTTGGCACTTTTCCTAGCTTTCTCTTCATGCATTCATGGCTTAGATATCACCAGCGCACTCAGCAAATACCCAGAATTCACCAAGTTCAGCAAGTACCTCACCGAAACCAAGCTTGTTGATCAAATCAACGGCCAGAAAGCCGTTACCGTCCTCGCCCTCGGCGACGACGCACTCGCCTCCCTTGACGGGAAGCCCCAGGACTACATCAAGGCAGTCCTGGCCAACCACGTGATTACCAACTACTACGACGAGAAGCTTCTCGTCGGAGCAGTTGGTAGCCACGAGAAGTTGGCCACACTCTCATCTTCTGGAATCTTCGTCAACTTGATCAACGATGGCGAGGTGGCTTTTGCACCCGCCGAGAAAGAACAGTATGAGAGCAAGCTCGTCAGAACCGTTGACACTCAACCCGAATCACTTTCAATCTTGGAGGTTCACCAGCCTATTTTTGCTCCATCCGCCGTTGCGAACGCCGTCGCAGCCACCGTGTCGTCGGAAGGGAAGAAGGTTCAAGAAGCAGCAGCCGGTATTAGCGGCGGTTGTCGCGTGGAGATGGGGCTCTTTGGCGGAGTAGTTATTGCCTTGGTTTCGCTCTTTGCTTCATTGTAA 639 0.5258 MGSRNTSVLCLALFLAFSSCIHGLDITSALSKYPEFTKFSKYLTETKLVDQINGQKAVTVLALGDDALASLDGKPQDYIKAVLANHVITNYYDEKLLVGAVGSHEKLATLSSSGIFVNLINDGEVAFAPAEKEQYESKLVRTVDTQPESLSILEVHQPIFAPSAVANAVAATVSSEGKKVQEAAAGISGGCRVEMGLFGGVVIALVSLFASL* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2006 212 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 2 175 - -
Amo08g2006 212 SUPERFAMILY FAS1 domain 20 122 IPR036378 -
Amo08g2006 212 Gene3D FAS1 domain 24 173 IPR036378 -
Amo08g2006 212 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Amo08g2006 212 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 2 175 IPR033254 -
Amo08g2006 212 ProSiteProfiles FAS1/BIgH3 domain profile. 23 159 IPR000782 -
Amo08g2006 212 Pfam Fasciclin domain 34 120 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2006 Amo-Chr8 32372119 32373691 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2006 - - adu:107463005 389.037