Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1988 ATGAGTCAACCCCTCGCCGATTCCCAAACCATCGCCAATCAGACCCAATCGCCGTCGGAAAACGCTGAAGTGGTGCTGCAGTACGTGGTGCTCCGGCGGGACCTGATCGACACGTGGCCGCTTGGTAGTGTGGTGACGCAGGGTTGCCATGCTTCTGTTTCCGCCGTTTGGTCCAACAAAGACGATCCTTTAACTATCGATTATTGCAGCCCCGAGAAAATCGATTCCATGCACAAGGTCACACTTGAAGTAAAGGGAGAAGCGCAGATTAAGAACTTGTCTGAGAAGCTCACATCTGGTGGAATCATTCACAAAATGTGGATTGAACAACCTGAAAACATACCTACATGCCTTGCCACAAAACCATACCCTAAATCAGTTGTATCTTCATATTTTAAGAAGTTAAAGCTCTGTAAGTGA 420 0.4762 MSQPLADSQTIANQTQSPSENAEVVLQYVVLRRDLIDTWPLGSVVTQGCHASVSAVWSNKDDPLTIDYCSPEKIDSMHKVTLEVKGEAQIKNLSEKLTSGGIIHKMWIEQPENIPTCLATKPYPKSVVSSYFKKLKLCK* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1988 139 PANTHER PEPTIDYL-TRNA HYDROLASE PTRHD1-RELATED 8 139 IPR042237 -
Amo08g1988 139 SUPERFAMILY Peptidyl-tRNA hydrolase II 26 138 IPR023476 -
Amo08g1988 139 CDD PTH2_like 25 138 - -
Amo08g1988 139 Pfam Peptidyl-tRNA hydrolase PTH2 27 138 IPR002833 GO:0004045
Amo08g1988 139 Gene3D Bit1 25 139 IPR023476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1988 Amo-Chr8 32179341 32182154 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1988 K05969 - gmx:100788281 236.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g1988 08 32179341 32182154 Amo18g3316 18 134562659 134565660 hybridization