Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1980 ATGGAGATCCGTAACGATGCAGAAACCAGCTCTTACATGAGCTTGTTTGCGGCAGTATCGTATGGAATTGCGTCGATGGCCATGGTTTTTATCAACAAGGCTGTTCTTATGCAGTATGCACACTCAATGACACTCCTCACTTTGCAGCAACTGGCTACCACCATGCTAATACACTTTGGTAGAAGCATGGGGTACACAAAAGCAAGAGGTGTGGATGTGACAACGGCCAAGCGACTGCTACCAGTTTCGATCTTTTATAATGCCAATGTAGCATTTGCTTTGGCAAGTTTGAAAGGAGTCAATATTCCAATGTATATTGCAATCAAGAGGCTTACACCTCTTGCTGTACTTATTGCTGGTTTTTTCTATGGAAAGGGGAGACCTACAATGCAGGTGACCCTTTCAGTGGTAATGACAGCTGCTGGAGTTCTAATTGCTGCCCTTGGGGATTTTTCTTTTGACCTTTTTGGGTATAGCATGGCCTTCATTTCCGTTTTTTTTCAGACCATGTATCTTGTTCTGGTGGAAAGATCTGGTGCTGAGGATGGACTTACATCAGTGGAAATAATGTTCTATAATAGCTTTTTGTCTCTTCCATTTTTGATGTTTCTTATCATAGCCACTGGGGAATTCCCAAATTCTTTATCAATATTACTAGCAAAGAGTTATTCTTTTCCATTTTTGGTGATACTTGTTCTTTCATTGGTAATGGGCATTGTTCTCAACTACACCATGTTCTTGTGTACTATTGTTAATTCAGCTCTAACGACAACTATTGTTGGAGTCCTCAAAGGGGTCGGTTCCACGACCCTTGGTTTTGTCTTACTTGGTGGTGTTCAAGTCCATGCTTTGAACGTGACTGGGTTGGTTATCAATACAGCTGGTGGTGTGTGGTATTCATATGCTAAATATCAGCAGAGAAGAAGTAAGACAGTGAAGCAAATAACAGATTTGGAGGCTCATCGTAAATAA 972 0.4115 MEIRNDAETSSYMSLFAAVSYGIASMAMVFINKAVLMQYAHSMTLLTLQQLATTMLIHFGRSMGYTKARGVDVTTAKRLLPVSIFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLIAGFFYGKGRPTMQVTLSVVMTAAGVLIAALGDFSFDLFGYSMAFISVFFQTMYLVLVERSGAEDGLTSVEIMFYNSFLSLPFLMFLIIATGEFPNSLSILLAKSYSFPFLVILVLSLVMGIVLNYTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVLLGGVQVHALNVTGLVINTAGGVWYSYAKYQQRRSKTVKQITDLEAHRK* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1980 323 PANTHER JC8.12-LIKE PROTEIN 12 305 - -
Amo08g1980 323 PANTHER SOLUTE CARRIER FAMILY 35 12 305 - -
Amo08g1980 323 Pfam Triose-phosphate Transporter family 23 300 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1980 Amo-Chr8 32054468 32057806 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1980 19 322 Lipid Metabolism Gene Families AT5G19980 25.776 2.63e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1980 K15281 - gmx:100777622 541.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g1980 08 32054468 32057806 Amo18g3302 18 134306503 134309908 hybridization