Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1003 ATGGCTTCTAGTGATGCCAATATGAAGATCGTTCATGGCGAAGCTGGTTATATACTCGAAGACGTTCCTCACTTATCCGACTACATTCCCAATCTTCCTACATATCCGAATCCGTTGCGGTCGAATCCAGCTTACTCAGTTGTGAAGCAATATTTCGTGCACGTGGACGATACCGTTCCTCAGAAGGTTGTTGTTCACAAGGATAGTCCCAGGGGTGTGCATTTTCGACGTGCAGGGCCTCGACAAAAGGTGTATTTTAAATCGGATGATGTGCGGGCATGCATTGTTACTTGTGGTGGTCTGTGCCCTGGCCTCAACACCGTCATCAGGGAAATTGTCTGTGGCCTTTCTTACATGTACGGTGTCAACAGTGTCATTGGCATAGATGGTGGTTATAGAGGATTTTATTCAAAAAACACCGTTACTTTAACACCTAAGGTGGTCAATGATATCCATAAACGTGGGGGTACGTTTCTTGGGACATCACGAGGAGGGCATGATACTAACAAGATAGTTGACAGCATCCAGGATCGTGGAATAAATCAGGTTTATGTTATTGGAGGTGATGGAACACAGAGAGGAGCAGCTGTGATTTATGAGGAAATTAGACGGAGAGGGCTGAAAGTAGCAGTAGTTGGGATTCCTAAAACCATAGACAATGACATCCCGGTCATTGACAAGTCATTTGGTTTTGATACTGCGGTTGAGGAGGCTCAACGTGCCATTAATGCAGCACACGTTGAAGCTGAAAGTGTTGAGAATGGCATTGGCATTGTAAAGCTTATGGGGCGCTATAGTGGTTTTATTGCAATGTATGCTACTCTTGCTAGTAGAGACGTGGACTGTTGCCTGATTCCAGAGTCACCCTTCTTCCTTGAAGGAAATGGTGGGCTGTTTGAATTTATTGAGAAGAGGCTAAAAGAAAACGGTCATATGGTTATAGTTATAGCAGAGGGGGCTGGTCAAGATCTTCTTACAGAGGAAAATGCTCAAGCCATGAATGCAAAAGATGCTTCTGGAAACAAGCTACTTCAAGACGTTGGTCTATGGATATCCCAAAGGATCAAGGATCATTTTGCCAGGAAAAATAAGATGGCTATCACTCTTAAATATATAGATCCCACTTACATGATACGTGCAGTTCCAAGTAATGCATCAGACAATGTCTACTGTACGCTTCTTGCTCAGAGTGCAGTTCATGGAGCAATGGCTGGGTTTACTGGATACACAAGTGGGCTTGTCAATGGAAGACAAACTTATATTCCATTCCAAAGAATCATTGAGAGGCAGAACCAGGTTGTGATTACCGATAGGATGTGGGCAAGACTTCTTTCTTCGACCAACCAGCCAAGCTTTATAAACCCCAAAGACGTGGACAAAACCAAGAAAACGGAACAGCATCCTACTCGGTTGTCAGAAGGGAAAAATTGCAAAGATGTTGAAGTCAAGAAAGCAGAGAAACCTCCCACTCAGATCCTCGGAGTGGACAATTCTAAAGTTGGACAAAATTCAGAAAACCATGTTGTCAGTAGTAACAAGGCATAA 1545 0.4362 MASSDANMKIVHGEAGYILEDVPHLSDYIPNLPTYPNPLRSNPAYSVVKQYFVHVDDTVPQKVVVHKDSPRGVHFRRAGPRQKVYFKSDDVRACIVTCGGLCPGLNTVIREIVCGLSYMYGVNSVIGIDGGYRGFYSKNTVTLTPKVVNDIHKRGGTFLGTSRGGHDTNKIVDSIQDRGINQVYVIGGDGTQRGAAVIYEEIRRRGLKVAVVGIPKTIDNDIPVIDKSFGFDTAVEEAQRAINAAHVEAESVENGIGIVKLMGRYSGFIAMYATLASRDVDCCLIPESPFFLEGNGGLFEFIEKRLKENGHMVIVIAEGAGQDLLTEENAQAMNAKDASGNKLLQDVGLWISQRIKDHFARKNKMAITLKYIDPTYMIRAVPSNASDNVYCTLLAQSAVHGAMAGFTGYTSGLVNGRQTYIPFQRIIERQNQVVITDRMWARLLSSTNQPSFINPKDVDKTKKTEQHPTRLSEGKNCKDVEVKKAEKPPTQILGVDNSKVGQNSENHVVSSNKA* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1003 514 MobiDBLite consensus disorder prediction 495 514 - -
Amo08g1003 514 SUPERFAMILY Phosphofructokinase 26 462 IPR035966 GO:0003872|GO:0006096
Amo08g1003 514 PRINTS ATP-dependent phosphofructokinase family signature 95 114 IPR022953 GO:0003872|GO:0006002|GO:0006096
Amo08g1003 514 PRINTS ATP-dependent phosphofructokinase family signature 179 195 IPR022953 GO:0003872|GO:0006002|GO:0006096
Amo08g1003 514 PRINTS ATP-dependent phosphofructokinase family signature 212 229 IPR022953 GO:0003872|GO:0006002|GO:0006096
Amo08g1003 514 PRINTS ATP-dependent phosphofructokinase family signature 230 248 IPR022953 GO:0003872|GO:0006002|GO:0006096
Amo08g1003 514 PRINTS ATP-dependent phosphofructokinase family signature 251 267 IPR022953 GO:0003872|GO:0006002|GO:0006096
Amo08g1003 514 PRINTS ATP-dependent phosphofructokinase family signature 308 320 IPR022953 GO:0003872|GO:0006002|GO:0006096
Amo08g1003 514 Pfam Phosphofructokinase 94 400 IPR000023 GO:0003872|GO:0006096
Amo08g1003 514 PIRSF ATP_PFK_TP0108 1 457 IPR012004 GO:0003872|GO:0005524|GO:0006096
Amo08g1003 514 Gene3D - 88 277 - -
Amo08g1003 514 Coils Coil 235 255 - -
Amo08g1003 514 MobiDBLite consensus disorder prediction 456 486 - -
Amo08g1003 514 MobiDBLite consensus disorder prediction 451 514 - -
Amo08g1003 514 Hamap ATP-dependent 6-phosphofructokinase [pfkA]. 22 453 IPR012004 GO:0003872|GO:0005524|GO:0006096
Amo08g1003 514 PANTHER ATP-DEPENDENT 6-PHOSPHOFRUCTOKINASE 5 483 - -
Amo08g1003 514 PANTHER - 5 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1003 Amo-Chr8 17055380 17060908 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1003 K00850 - gmx:100818755 875.159