Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0998 ATGTTCTCAATTGCAGCTATCAATGATACTGACCCGAAAGCTAAATGGGAGCCACTAGCTCCTACCAAAGAAGCTCAGGAATTTCATCTGACTCAAACTTATCATGATGGGTTACTCAAGTTACAATCTAAAGACTACCAAAAGGCTCGCGAGTTATTAGAATCAGTACTTAAAGATCCTCTTTTAGCTAATGCACAGGTGGATAGCAGTGTCAGTGATAGTCATCTTTTGCAACTAAGATTTTTGGCACTGAAGAACCTTGCCACCGTATTTCTTCAGCTAGGTTCTGCACATTATGAGAACGCTCTGCACTGTTATCTTCAAGCTGTCGAGATTGATTCAAAAGATTCTGTTGTCTGGAACCAGCTGGGAACATTGTCATGCTCAATGAACTTACTGAGTATTTCCCGTTGGGCATTTGAGCAAGGCCTCTTGTGTAGCCCCAATAACTGGAATTGCATGGAAAAGCTTTTGGAAGTTCTTATTGCTATTGGCGATGAGGTTGCTTGCTTGTCTGTCACTGAGTTGATTTTGAGGCACTGGCCATCACATTCTCGTGCATTGCATGTTAAAAATACCATTGAAGAGTCAGAACCATTGCCATTTGCTCCCAGAGGCATAGACAAACTTGAACCGAAACATGTGCGCCTCAAATTTCCGGATAAGAGAAAAGCTAGTAATGAGAATCCAGATGAGGGTGTTGCATTCAAAAAGCCAAACCAGAACAGAGAACTGCAGCTGACAGAAGCTTCCTGGGTGGCTCTGGCCGATGCCCTGCTGGAAATCCTACAAAGTTCTGATGTAAACCCTAAAAAATTGTGCATCTCTCCGGATGTTAGACTAAGCATAAGCTTACCTTGTTTTGAAGCTGCTATGAATACCGTGGAAGGGGTAGGGCCCTGTGGTGAAAGCAGTGCTTTGCGTGATGGTAACATAGAAAGGCCAAGTGCTAAAGGTAAAGAAGCAAATATCCAAGAAGAACAACCACATGAAAGGCGAAGTTCTCGACTAGAAAGGCTGCGTAGTCGTAAACCAGGGAAAGAAGAATCGGATTCTTGTGGCAAGGACCGGGCAAAGGTTGTCATTCAATACTTAGAGCCATTCATTGATCGTGGATTGGGTAGTCCAGATGTTGCTGATAGTGATAACTCTGCATTATCCTATTCAGTAAATTCTGAAAATAATAATGTTTGTGCATTTCTATTACAAACTTCAAAAAATTACGGTGCTTATCATATGGGGCACTTGCTTTTGGAAGAGGTTGCAAGACAAGGCCTCCTATATCAAGATGCTTTTGTCAAATTTCTTGAGTTAGAAAGGTTGACACGGCATTGGGGAATGGAACGAACTGCTGAATGTAGTCTTTTTCTTGCTGAGTTGTATCATGACTTTGGATTATGCTCCTCCCCTGGTTCTAAACAATCAGAATATATGTCAGAGACATCTTATCATCTCTGTAAGATCATAGAGTCTGTAGCTCTAGATTATCCATTTCACTTGAAACATGCCTTGAATGAAGATGAAGGTTTGCTTGGTAGTTTCCAAGGGATGGATAGAATATCAGTTGATACCTCTAATAAGAGCAATTCAGACAGCTCGTTTCTGATGGAGAATAGTGCATTTTGGGTTCGATTCTTCTGGCTAAGTGGGAGAATGTCTGTTTTTGATGGTAACAGGGCAAAAGGTTGTGAAGAATTTTGTATTTCTTTGTCACTTTTGGCAAAGCGGGAAACTATGGAAGATTCTCTATGTTCAGTCCGTCGTATGCATTGCAAGGCCGTAAAAGAGCTGAACATTGATAGAGTTCTTTACGAGATCAATATATTAAAGGTCAATTTCTTGATGGAAAATTCTGTCATTGAGATGATGGAACAAGAAAAGTATTTGGAGTGTATATCATTGCTCTCTCCACATCTATTCTCCACACAGGATGTCTACATTGATGCATTTTCTCTTACAGTGCCAGATAAAAAAGATGAAAAAATAACTTCCATTGAACTAATGGCTTTAGATGTTCTAATAGAAGCATGCCAGAAGATAGAGCCAATGGATGTAGAAATGTATTTCAATTGCCACTATAAAAAGCTGAAAATACTTATGGCAATAATGGGATTAAATAAATGTATGACATCATTTATATTTTCTGATCAAACTACTGACTTAGTGGTATCTCCTAATTTTGAGATTGATTCAAATGAAAGTTCAACCAAGCATTGTAGTCACTTGGTTGCACAGGAAGTGAAGGCACTCTCGGATTGTATTTCTCAAGTGAAGAAAGTTATTGACCATCGTGGAGATTCTGATGGCCTTACAGTTCCAACAAACAGCATTATCCAAATGCAGTCTCTATTATTGTTAATCATGAGATATGTTGCAAACTTACTTGTCTGTAACAAAGCCTCTGAACCAGTACATTCTGATGAAGAAGAAAACAACTATTTTGTTGATGCAGCCATTGTTTTCTGCAAACTCCAGCATCTCAGCCCAGCTACACCTATCAAAACTCAAGTTGATTTAATTGTTGCAACGCATGACTTGCTTGCTGAGTATGGACTGTGCTGTGTCGGTGAAGGTGGAAAAGGTGAAGAAGGAATATTTCTTAGATTTGCAATAAAGCATCTCTTGTCCTTGGATATGAAGCTTAAGTCGAGCTTTAACTATCTAAATAAAGAATCCGTGCAATGTGAAGAGGTATCCAGGAATAGTCTTGTAAATTCATCTGCAGAAGATTCAAAGTCAGATATATTAGATGTCCAGATGGATTGGACAAAAATAGGAGAACTAAATTCTGGGAAGGAGGTTTCTGAAGGAATAATATCAGAAAGGATTGCATCTTGCCGAGTTCAAGAAAAAGACAGCAAGGAAATGGTGTGTGAAGATCATGGAGGGGCTGGGACTGACAGCGGTTTCAGTAAGGTTGAAAATCCAAGCAATCTATTGATTGATGGGAATGAACTTTCAGAAGATGAAATGGAGGAACTTGAGTCAAAAATTGACAGTGCCTTAGATCAATGCTTTTTCTGTTTATATGGATTGAATCTAAGATCTGATTCATCATATGATGATGATATAGTGATGCACAAAAATACAAGCCGGGGAGATTATCAGACCAAAGAACAATGCGCTGATGTTTTCAAGTATGTACTTCCCTATGCAAAGGCATCTTCTAGGACTGGATTGGTCAAACTTCGTAGAGTTTTAAGAGCCATCAGGAAGCACTTTATGCTGCCACCAGAGGACCTGTTGTTAGGAAACCTGATAGATAAGTTCTTAGATGATCCGAATGTTTGTGAAGATAAACTCTCAGGTGATGCTGGATCTGATGGATTTCTTGAAGCTATAAAAAGGATTATGTTTCCTGATAAGGGAGGACTTGTACAGTACAACACAACATTATTGAGGAGGTCTGAGCCATATTTGGAGGTCTACTGTAACTTGTATTATTTCTTAGCTCTATCTGAGGAAATGAGTGCTACAGATAAATGGCCTGGATTTGTTCTCACCAAGGAAGGAGAAGAGTTTGTTGAACAAAATGCAAAGCTCTTTAAATATGATCTCATGTACAATCCTCTACGTTTTGAAAGCTGGCAGCGACTTGGGAATATTTACGATGAGGAAGTAGATTTGTTGTTAAATGATGGCAGCAAGCATGTAAATGTTGTGGCATGGCGGAAGAATCCTACTTTATCCAGTAGAGTGGAAACAAGCCGAAGGAGGAGTAGACGGTGCCTGCTAATGAGTTTAGCTTTGGCTAAGACCTCTGCGCAACAGTGTGAGATACACGAGTTACTAGCACTGGTATACTATGACAGCCTTCAGAATGTAGTGCCATTTTATGATCAGAGATCTGTTTTGCCCTTAAAGGATGCAGCATGGAAGATCTTTTGCAAGAATTCAATGAGACATTTCAAGAAAGCATTCATGCTGAAGCAAGATTGGTTGCACGCATTTTACTTGGGTAAACTCAGCGAAAAGCTTGGATATTCACATGAAACTGCACTAACGTATTATAGCAAAGCCATTGCTTTGAACACATCAGCTGTTGATCCTGTGTATAGGATGCATGCCTCACGTTTGAAGCTGCTGATGAAGTGTGGAAAACATAATTTGGATATTTTAAAGGTTCTTTCATCACACTCGTTTGATCAATCTGTAAAAGATGCTGTCATGAGTATCCTTTGTGATGTGGATAGCTCATTATCAAATGAAAAGGAGAGAAGCATTAAGGCCAATTCTCTAGAAATTAACAATGAAGGGTTGCTCAAATTGGAGACTGCATGGTCTTTGCTTTATAGTGATTGCCTTTCGGCCCTCGAAACCTGTGTGGAGGGAGATCTCAAACATTTTCATAAGGCCAGATACATATTAGCTCAGGGGCTTTATAAAAGGGGTGAGAGCGGTGATACAGAGAGAGCAAAGGATCAACTTTCTTTCTGCTTCAAATCTTCACGCTCATCCTTTACAATAAATATGTGGGAAATTGATAGCACGGTTAAAAAAGGACGGCGCAAGGCACCAGGGTCAGCTGGGAACAAAAAATCCCTCGAGGTTAACTTGCCAGAAAGTTCACGAAAATTCATTACTTGCATTCGAAAGTATGTGCTGTTTTATCTCAAACTATTGGAAGAGACTGGAGATAGATGTACTCTTGAACGTGCATATGTTTTTCTTCGAGGAGATAAGCGGTTTTCACTATGCATTGAAGATATTGTACCAGTGGCCATTGGAAGATATTTGAAAGCCCTGGTTTCAGCTATGGGCCATTCTCAGACTTTAAGCTCTGGTCCAGTAAGCAGTTCTGACAATGTGCTCGAAAAAATGTTTGCTTTGTTCATGGAGCAAGGGAGCTTATGGCCAGAAATATGCAGCTTGCCTGAAATTGAGAGCCCAGATACATCAGAGAGTATCATATACGGATATCTGCATGAACACATTGTATCATTGGAGAAAAATGGAAAACTGGAAACCCTTGAAGCAATAAATGAGAAGATTAGGAAACGATTTAAGAATCCTAAGTTCTCAAATAGTAGTTGTGCAAAAGTATGCAGGCATTCTTCTGTTGCTTGGTGTCGAACTCTTGTATATAATTTGGCACAAATTACTCCAATATCATGTGAATTCCCGAATAGAATTCAAGTTCAGAATTCAACAGATGGTGGGATGGATAATGGCCAACTGCTCTGTATTGACTTGCAACCGCACGAATTATGGAGTACAACTTTTGAAGATCCAACTCATTTGGAAAAAATTGAAACAAAATGGATCGCGATTTTATCAAAAATAAAGAATATAGTGATCAACAAAGTTTCCGATGAAAATTTGGAAACTGCAAACACTTTGCTCCGGGCTTGCTACAATTTTTACCGGGAGAGTTCTTCTGTGGTGCTTTCCTCTGGGCTCAACTCTTATTTGATCCCATACCAATTAGCAGCAGAGACCCCATTCAACCCTAATATGAGTGGGATTGAAGCACTTGATCTGAGCATCCCTAGGAAGCTTCTTTTGTGGGCATATGCTCTACTGCACGGACGATATGCAAATATCTCCTTTGTTGTAAAGCATTGTGAAGAATTCACAAAGTCAAAGATGAAAAGAGGAAGTGGAACTTCACCCGGAATTTCAAACTCACCTGCTGCCTCTACTCTTCCAGGTAGCAGCAGAAGTGTACAAAATTCTGCAGGATGTAGTGATGTTGATTCTACCCAAGTCACAGCAGTCGGGTCTGGTTCTTTGTCTGGCAGCAATACAACGAACTTCGTGAGTTCCGATGAGATTCAAAAGAATCTCTTTGCTTTTCCATCCCACCTGCATCAAAATACCACTAATGATGCAGAAAGAATCAATTTGACAGCTCGAGAAGGAGATGCAGATAGAAATTGA 5880 0.3986 MFSIAAINDTDPKAKWEPLAPTKEAQEFHLTQTYHDGLLKLQSKDYQKARELLESVLKDPLLANAQVDSSVSDSHLLQLRFLALKNLATVFLQLGSAHYENALHCYLQAVEIDSKDSVVWNQLGTLSCSMNLLSISRWAFEQGLLCSPNNWNCMEKLLEVLIAIGDEVACLSVTELILRHWPSHSRALHVKNTIEESEPLPFAPRGIDKLEPKHVRLKFPDKRKASNENPDEGVAFKKPNQNRELQLTEASWVALADALLEILQSSDVNPKKLCISPDVRLSISLPCFEAAMNTVEGVGPCGESSALRDGNIERPSAKGKEANIQEEQPHERRSSRLERLRSRKPGKEESDSCGKDRAKVVIQYLEPFIDRGLGSPDVADSDNSALSYSVNSENNNVCAFLLQTSKNYGAYHMGHLLLEEVARQGLLYQDAFVKFLELERLTRHWGMERTAECSLFLAELYHDFGLCSSPGSKQSEYMSETSYHLCKIIESVALDYPFHLKHALNEDEGLLGSFQGMDRISVDTSNKSNSDSSFLMENSAFWVRFFWLSGRMSVFDGNRAKGCEEFCISLSLLAKRETMEDSLCSVRRMHCKAVKELNIDRVLYEINILKVNFLMENSVIEMMEQEKYLECISLLSPHLFSTQDVYIDAFSLTVPDKKDEKITSIELMALDVLIEACQKIEPMDVEMYFNCHYKKLKILMAIMGLNKCMTSFIFSDQTTDLVVSPNFEIDSNESSTKHCSHLVAQEVKALSDCISQVKKVIDHRGDSDGLTVPTNSIIQMQSLLLLIMRYVANLLVCNKASEPVHSDEEENNYFVDAAIVFCKLQHLSPATPIKTQVDLIVATHDLLAEYGLCCVGEGGKGEEGIFLRFAIKHLLSLDMKLKSSFNYLNKESVQCEEVSRNSLVNSSAEDSKSDILDVQMDWTKIGELNSGKEVSEGIISERIASCRVQEKDSKEMVCEDHGGAGTDSGFSKVENPSNLLIDGNELSEDEMEELESKIDSALDQCFFCLYGLNLRSDSSYDDDIVMHKNTSRGDYQTKEQCADVFKYVLPYAKASSRTGLVKLRRVLRAIRKHFMLPPEDLLLGNLIDKFLDDPNVCEDKLSGDAGSDGFLEAIKRIMFPDKGGLVQYNTTLLRRSEPYLEVYCNLYYFLALSEEMSATDKWPGFVLTKEGEEFVEQNAKLFKYDLMYNPLRFESWQRLGNIYDEEVDLLLNDGSKHVNVVAWRKNPTLSSRVETSRRRSRRCLLMSLALAKTSAQQCEIHELLALVYYDSLQNVVPFYDQRSVLPLKDAAWKIFCKNSMRHFKKAFMLKQDWLHAFYLGKLSEKLGYSHETALTYYSKAIALNTSAVDPVYRMHASRLKLLMKCGKHNLDILKVLSSHSFDQSVKDAVMSILCDVDSSLSNEKERSIKANSLEINNEGLLKLETAWSLLYSDCLSALETCVEGDLKHFHKARYILAQGLYKRGESGDTERAKDQLSFCFKSSRSSFTINMWEIDSTVKKGRRKAPGSAGNKKSLEVNLPESSRKFITCIRKYVLFYLKLLEETGDRCTLERAYVFLRGDKRFSLCIEDIVPVAIGRYLKALVSAMGHSQTLSSGPVSSSDNVLEKMFALFMEQGSLWPEICSLPEIESPDTSESIIYGYLHEHIVSLEKNGKLETLEAINEKIRKRFKNPKFSNSSCAKVCRHSSVAWCRTLVYNLAQITPISCEFPNRIQVQNSTDGGMDNGQLLCIDLQPHELWSTTFEDPTHLEKIETKWIAILSKIKNIVINKVSDENLETANTLLRACYNFYRESSSVVLSSGLNSYLIPYQLAAETPFNPNMSGIEALDLSIPRKLLLWAYALLHGRYANISFVVKHCEEFTKSKMKRGSGTSPGISNSPAASTLPGSSRSVQNSAGCSDVDSTQVTAVGSGSLSGSNTTNFVSSDEIQKNLFAFPSHLHQNTTNDAERINLTAREGDADRN* 1960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0998 1959 Coils Coil 984 1004 - -
Amo08g0998 1959 MobiDBLite consensus disorder prediction 301 355 - -
Amo08g0998 1959 MobiDBLite consensus disorder prediction 1864 1895 - -
Amo08g0998 1959 MobiDBLite consensus disorder prediction 219 240 - -
Amo08g0998 1959 MobiDBLite consensus disorder prediction 313 355 - -
Amo08g0998 1959 MobiDBLite consensus disorder prediction 1862 1895 - -
Amo08g0998 1959 Gene3D Tetratricopeptide repeat domain 24 199 IPR011990 GO:0005515
Amo08g0998 1959 PANTHER CALCINEURIN-BINDING PROTEIN CABIN 1-RELATED 1 1918 IPR033053 -
Amo08g0998 1959 SUPERFAMILY TPR-like 33 169 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0998 K17613 - gmx:100783154 3009.55