Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0969 ATGAACCCTCTTCTTGATAACGATCAAGTTCAACATAACCTTGAGAAATGGCCAAGTCCTAACGAGGCGTTTGCAGAAATGAAGGCCATAGGGAAAATATCAGGCCCAACAGCCATAACGGGCTTGCTTATGTATTCAAGATCAATGATCTCGATGCTATTCCTCGGCTACCTCGGTGATGCCGAGTTAGCCGGGGGTTCCCTCTCCATTGGGTTCGCCAACATAACCGGCTACTCTGTCATCTCCGGTTTAGCCATCGGAATGGAACCGCTTTGTGGACAAGCTTACGGCGCCAAACAGTTGAAGATTCTGGGACTCACCCTTCAAAGAACCGTCCTCCTCTTACTGGCGGCCACCGTGCCCATCAGCGTGGCATGGCTCAACATGGAGAACATACTCTTATGGTGTGGACAAGACCACCAAATCTCGTCCACAGCTCAAATTTTCATCCTCTTTTCTATCCCTGATTTTTCTTTTCTTTCCCTCCTTCACCCTCTAAGAATCTATCTCAGAGCACAGAGCATTACGCTTCCGATAACGTTTTGCTCCGCCGTCTCCGTTCTCCTCCACGTTCCGCTGAACTTCCTCCTTGTTGTCCATTTTAAGATGGGTGTTGCCGGGGTGGCCGTTGCAATGGTGTGCTTCAACTTCAATCTCTTCGTCTTCCTCTCCTCGTTCGTCTACTTCTCCGGCGTCTATAAAGATTCCTGGGTTTCTCCGAGCATTGACTGCTTCAAAGGATGGTCATCGCTTCTTGCATTGGCTGTGCCGTCCTGCGTCTCCGTTTGCCTAGAGTGGTGGTGGTACGAATTTATGATAATGCTTTGTGGACTGTTGGTGAATCCAAAAGCAACCGTTGCATCAATGGGAATCTTAATCCAAACAACATCTTTGGTCTACGTGTTCCCATCGTCTCTTAGCCTTGGCGTCTCCACCAGGGTGGGAAATGAGTTGGGAGCCAATAGGCCCGCCAAGGCCCGCATTTGCATGATAGTTTCACTTTTTTGTGCAATGGGCTTGGGCATCACGGCGATGATCTTCACCACCTTGATGAGGCACCAATGGGGAAGGTTCTTCACCAATGACCAAGAAATTCTAAACCTTACGGCCATAGCATTGCCAATTGTCGGGCTTTGCGAGCTCGGCAACTGTCCACAAACTACAGGTTGCGGGGTTCTGCGGGGCTGTGCAAGGCCCACCATTGGAGCTAACATAAATTTGAGTTCGTTTTATTTGGTGGGTATGCCGGTCGCGGTAGTACTTGGATTTGTGAGTAAGATGGGATTTGTTGGGCTTTGGTTTGGGTTGCTTGCGGCCCAAGCAACATGTGCGGGCCTCATGTTGTTTGTTCTATGCAAGACTGATTGGAATGCTGAAGCACAAAAAGCAAAGGAACTAACCAATGCTGCTTCTTCTTCTGTGAATAATTCCAAAACGAAAGGAGAGGGTAACAAGAACATCAATGATCATCATCATAATCATCTCGAGAAGATTGTGATCGCCGTAGAGAATGATGAACTTGGCAAGATCACAGATCAATCATCATCACTTGAAACCGACCCACTGATCACACCTACTACCAATAATAAACAGTGTAAATTAATTAATTATTGTTGA 1617 0.475 MNPLLDNDQVQHNLEKWPSPNEAFAEMKAIGKISGPTAITGLLMYSRSMISMLFLGYLGDAELAGGSLSIGFANITGYSVISGLAIGMEPLCGQAYGAKQLKILGLTLQRTVLLLLAATVPISVAWLNMENILLWCGQDHQISSTAQIFILFSIPDFSFLSLLHPLRIYLRAQSITLPITFCSAVSVLLHVPLNFLLVVHFKMGVAGVAVAMVCFNFNLFVFLSSFVYFSGVYKDSWVSPSIDCFKGWSSLLALAVPSCVSVCLEWWWYEFMIMLCGLLVNPKATVASMGILIQTTSLVYVFPSSLSLGVSTRVGNELGANRPAKARICMIVSLFCAMGLGITAMIFTTLMRHQWGRFFTNDQEILNLTAIALPIVGLCELGNCPQTTGCGVLRGCARPTIGANINLSSFYLVGMPVAVVLGFVSKMGFVGLWFGLLAAQATCAGLMLFVLCKTDWNAEAQKAKELTNAASSSVNNSKTKGEGNKNINDHHHNHLEKIVIAVENDELGKITDQSSSLETDPLITPTTNNKQCKLINYC* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0969 538 PANTHER PROTEIN DETOXIFICATION 13 480 - -
Amo08g0969 538 TIGRFAM matE: MATE efflux family protein 36 433 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Amo08g0969 538 MobiDBLite consensus disorder prediction 469 489 - -
Amo08g0969 538 CDD MATE_eukaryotic 26 462 IPR045069 GO:0042910|GO:1990961
Amo08g0969 538 Pfam MatE 36 196 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Amo08g0969 538 Pfam MatE 257 420 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Amo08g0969 538 PANTHER MULTIDRUG RESISTANCE PROTEIN 13 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0969 Amo-Chr8 16550954 16553085 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0969 K03327 - gmx:100788339 776.548