Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0932 ATGGATTTCAGGTTGATGGGACTCGATTCTCCATTGCTGAGCACCATTCACCACATGATGGATATGAGCGACGACAATGCCGACGCCAAGAACATCAACGCTCCCACAAGGACCTACGTGCGTGACGCGAAGGCGATGGCGGCTACTCCGGCCGACGTGAAGGAGTATCCTCAGTCGTACGTGTTCGTGATCGACATGCCGGGACTGAAGTCCGGTGACATTAAGGTTCAGGTGGAGGACGACAACGTTCTGATCATCAGCGGCGAGAGGAAGAGGGACGAAGAGAAAGAAGGTGCTAAGTATTTGAGGATGGAGAGGAGGGTTGGAAAATTCATGCGCAAGTTTGTGCTGCCGGAGAATGCAAACACTGATGCTATCTCTGCCGTGTGTCAAGACGGAGTTCTCACCGTCACCGTTCAGAAGCTTCCTCCTCCTGAGCCTAAGAAGCCTAAGACTATTGAGGTTAAGATTGCTTGA 477 0.5199 MDFRLMGLDSPLLSTIHHMMDMSDDNADAKNINAPTRTYVRDAKAMAATPADVKEYPQSYVFVIDMPGLKSGDIKVQVEDDNVLIISGERKRDEEKEGAKYLRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPEPKKPKTIEVKIA* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0932 158 SUPERFAMILY HSP20-like chaperones 28 150 IPR008978 -
Amo08g0932 158 Pfam Hsp20/alpha crystallin family 52 156 IPR002068 -
Amo08g0932 158 PANTHER 18.0 KDA CLASS II HEAT SHOCK PROTEIN 8 157 - -
Amo08g0932 158 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 42 158 IPR002068 -
Amo08g0932 158 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 8 157 - -
Amo08g0932 158 Gene3D - 9 157 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0932 Amo-Chr8 15926644 15927654 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0932 K13993 - pop:7462237 270.396