Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0908 ATGGAGGAAGGGTACCCCACAAGCAAGTTTAAGASGGTGTGTGTCTTCTGCGGCAGCAACTCCGGCAACCGTGAAGTCTTCAGCGACGCTGCGATTCAATTAGGCAATGAACTGGTTAAGCGGAATATAGACTTGGTGTATGGTGGGGGCAGTGTTGGATTAATGGGCTTAATATCTCAGAGGGTGTATGATGGAGGATGCCATGTTCTAGGGATCATTCCAAAAGCTCTAATGCCTCTTGAGATATCAGGTGAAACAGTGGGTGAAGTAAGAATTGTTTCTGATATGCATGAGCGTAAAGCTGCAATGTCTCAAGAAGCTGATGCATTTGTTGCTCTCCCTGGAGGATATGGAACCATGGAAGAGCTGTTGGAAATGATAACTTGGGCCCAACTTGGGATTCATAAAAAACCGGTTGGTCTACTGAATGTTGATGGTTACTATAACTGTTTGCTTGCACTATTTGACAATGGTGTTAAAGAAGGATTCATTAAGCCGGGTGCGCGAAATATAGTTGTTTCTGCTCCATCAGCCAAAGAACTTATGATGAAGATGGAGCAATATACTCCTTCACATGAGCATGTTGCCCCTCATGAGAGCTGGGAGATGAAGCAATTAGGTAATTATCCAGGACAAGAAAACTCAGAGTGA 651 0.4409 MEEGYPTSKFKXVCVFCGSNSGNREVFSDAAIQLGNELVKRNIDLVYGGGSVGLMGLISQRVYDGGCHVLGIIPKALMPLEISGETVGEVRIVSDMHERKAAMSQEADAFVALPGGYGTMEELLEMITWAQLGIHKKPVGLLNVDGYYNCLLALFDNGVKEGFIKPGARNIVVSAPSAKELMMKMEQYTPSHEHVAPHESWEMKQLGNYPGQENSE* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0908 216 PANTHER LOG FAMILY PROTEIN YJL055W 8 206 - -
Amo08g0908 216 TIGRFAM TIGR00730: TIGR00730 family protein 11 188 IPR005269 GO:0009691|GO:0016787
Amo08g0908 216 MobiDBLite consensus disorder prediction 192 216 - -
Amo08g0908 216 Pfam Possible lysine decarboxylase 55 185 IPR031100 -
Amo08g0908 216 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 8 206 - -
Amo08g0908 216 SUPERFAMILY MCP/YpsA-like 9 188 - -
Amo08g0908 216 Gene3D - 10 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0908 Amo-Chr8 15711624 15714627 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0908 K22522 - gmx:100785484 412.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0908 08 15711624 15714627 Amo17g2905 17 131224997 131228145 hybridization